G125895


Basic Information

Item Value
gene id G125895
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 25616524 ~ 25616941 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU145379
actaaaataaaaagtaataatactAGTAAAACAATAagaataaaaataacaataacgaggctagtcagtgtggaggctatatacagggacaccggtaccgagtcagtgtggaggctatatacagggacaccggtaccgagtcagtgtggaggctatatacaggggcaccggtaccgagtcagtgtggaggctatatacaggggcaccggtaccgagtcagtgtggaggctatgtacaggggcaccggtaccgagtcagtgtggaggctatatacagggacaccggtatcgagtcagtgtggaggctatatacaggggcaccggtaccgagtcagtgtggaggctatatacaggggcaccggtaccgagtcagtgtggaggctatatacaggggcaccggtaccgagtcagtgtggagg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU145379 True 418 lncRNA 0.42 1 25616524 25616941

Neighbor

gene id symbol gene type direction distance location
LOC110539045 mrap2 coding upstream 202149 25403433 ~ 25414375 (+)
LOC110534557 LOC106605501 coding upstream 220190 25377221 ~ 25396334 (+)
LOC110534548 LOC106579462 coding upstream 290868 25294643 ~ 25325656 (+)
ascc3 ascc3 coding upstream 325000 25151016 ~ 25291524 (+)
LOC110538989 NA coding upstream 893151 24685282 ~ 24723373 (+)
tsnare1 LOC106605505 coding downstream 214462 25831403 ~ 25974877 (+)
LOC110539113 LOC106605506 coding downstream 482202 26099143 ~ 26113953 (+)
cdk14 LOC106605507 coding downstream 506772 26123713 ~ 26330981 (+)
fzd1 LOC106605515 coding downstream 706066 26323007 ~ 26326895 (+)
LOC110539173 LOC106605512 coding downstream 835740 26452681 ~ 26547503 (+)
G125856 NA non-coding upstream 23528 25592662 ~ 25592996 (+)
G125819 NA non-coding upstream 75980 25540181 ~ 25540544 (+)
G125797 NA non-coding upstream 94593 25521656 ~ 25521931 (+)
G125787 NA non-coding upstream 102015 25514275 ~ 25514509 (+)
G125752 NA non-coding upstream 135594 25480721 ~ 25480930 (+)
G125902 NA non-coding downstream 9250 25626191 ~ 25626396 (+)
G125925 NA non-coding downstream 52120 25669061 ~ 25670894 (+)
G125926 NA non-coding downstream 54317 25671258 ~ 25716956 (+)
G125930 LOC106605503 non-coding downstream 57990 25674931 ~ 25732039 (+)
G125957 NA non-coding downstream 110366 25727307 ~ 25784903 (+)
G124451 LOC106578403 other upstream 742690 24873051 ~ 24873834 (+)
LOC110538915 LOC106605649 other upstream 1072298 24540963 ~ 24544247 (+)
G124121 LOC106605585 other upstream 1467931 24146861 ~ 24148593 (+)
LOC110538497 LOC106605627 other upstream 1734888 23861576 ~ 23881639 (+)
G125934 NA other downstream 65939 25682880 ~ 25757853 (+)
G126387 LOC105417071 other downstream 432909 26049850 ~ 26050104 (+)
G126727 LOC106581475 other downstream 1009908 26626849 ~ 26628649 (+)
G127190 cf113 other downstream 1177269 26794210 ~ 26795762 (+)
G127198 LOC106605538 other downstream 1240757 26857698 ~ 26861242 (+)

Expression


Co-expression Network