G125925


Basic Information

Item Value
gene id G125925
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 25669061 ~ 25670894 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU145409
ACACATTCATTTTGTGCTCTGAAAACTGTACATTAACAAAGAGTCAACCCCTGTGAACTAAAAAGGTGGAGGGGCGGTGGAGGTTAAAGGTCAGGGGACAGAGGCCAGGGTTCATGTCAGACACGTACAGATCTGAGGAGGGAGTGACAGTCAGTGATACCAAAACACACACTGTTACATGGAGTTACAGAACACTCATATTCCAGTACCCTGAAAAGGATGGGAGGGGAATCATAATatgtgtccgaaatggcaccctgtgcactacatagggaatagggtgccatttcggacgcaGATGTAATGTGAATAATCATGGTCATAATTATAATAATGACAACAATAATTCCCAAGCACAGTAAGAAAGATATTTATAGGCTAAAATTCATTCTGTAGAACTCTGTTGAAATAATTACATTGCTGTACAACAGGACTCCAAAAGAGCCTTGTGCTTTCTCTGTGTGCAACTAATCCTAACCCCATACTGCAGAGTCACAACCTCTGTCATGTCCTATACAGTATTtatcatatatatttttatatttattcatTTCCATTGTCATTATTAAGCATCATTCTTTATATACTTTGTGACATGAGTGTCCTTCATTTTTTACCACCTGCATTTACCGAACAAGCAGAATTATATTTGCCACAAATGTACCAAGCCTGCTTGTACACCAagcaaccaatcaaccaatcaaaacaCTGTCTCATTGGCTTCTGCTGAGGTCATAGAAGCTTCCACCAACGAGATATGGCCATCTCGGCTttctgtgatgtcattaagggcaTCCGCAAATGAGATATCTCATCCTTGTTGGTCTATGCTGATGTCACTATGGCCCCCACCAATGGGAGGGTTTTCCACCCTTTGACTGACTGTGATGTCATCGGTCTGCTCCCTTCCTGTCAAGCGGGTGGGGACACTGTCTGACAGTGcagtggagggtggggggggggggctcttagTTGGCATGGAGAGGCACATGGTTATGGTCCAGCAGTCTGCCTCCTCCACTGCCTAGGCGTGTTTGGGACATGTACTGGACATGTAGTTTGGTTGGAACATGAACTGTATGGCTGGTCCAGGTGATCTGTTAGCAGGCTGGTGAAGTGAGTCCATAGGCAGTCTGTCCTTTTAATCTACACTACCTACACCACCCAAATACCAAACATGGCTAACCATCCACAGAGATCtaccaggaggagagagggactcaAGTATGTGTCCAGTGAAGTAATAATGTGGATAATAACAGACCAGATATATGACTTTCTGACATAGTAAACAAAAAACTGATTCCAGCAGCAATAAGAAAATATAACAAAATGCACCGCAAACCTGTTCTCATTCCCCCCATTTATCaggccattctctctctctctctctctctctctctctctctctgtctctgtctcaccacTGCCCATTTCGTTGGTCATTGATCGTTGGTCGTTGGTTCCCAGATTGAGATGTGGAGCTGCGAGAAGGGAcgaagtctgtctgtctgagagctGGGCTGGGGGACGGGGTtggctgctctctgtctctctctccgtctgtctctctgtctcagtctcacaCCTCTGTCTGCAGGTCCATGAGCTCCTGTCCCACCAGAGGGATGGTGGCGCTGGCCTTCTCCCACTCCACGTTCTGCAGCTCCAGGGGAGAGGCCGCCAAGGGCTCCAGGTCCTTCCTCATCCACGATGGGGGAGATTGGGTCTTCCTGATGCCCTCCCAGGCTCTCTTACTGGGTGTCTG

Function

NR:

description
brain-specific angiogenesis inhibitor 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU145409 True 1768 lncRNA 0.47 2 25669061 25670894

Neighbor

gene id symbol gene type direction distance location
LOC110539045 mrap2 coding upstream 254686 25403433 ~ 25414375 (+)
LOC110534557 LOC106605501 coding upstream 272727 25377221 ~ 25396334 (+)
LOC110534548 LOC106579462 coding upstream 343405 25294643 ~ 25325656 (+)
ascc3 ascc3 coding upstream 377537 25151016 ~ 25291524 (+)
LOC110538989 NA coding upstream 945688 24685282 ~ 24723373 (+)
tsnare1 LOC106605505 coding downstream 160509 25831403 ~ 25974877 (+)
LOC110539113 LOC106605506 coding downstream 428249 26099143 ~ 26113953 (+)
cdk14 LOC106605507 coding downstream 452819 26123713 ~ 26330981 (+)
fzd1 LOC106605515 coding downstream 652113 26323007 ~ 26326895 (+)
LOC110539173 LOC106605512 coding downstream 781787 26452681 ~ 26547503 (+)
G125902 NA non-coding upstream 42665 25626191 ~ 25626396 (+)
G125895 NA non-coding upstream 52120 25616524 ~ 25616941 (+)
G125856 NA non-coding upstream 76065 25592662 ~ 25592996 (+)
G125819 NA non-coding upstream 128517 25540181 ~ 25540544 (+)
G125797 NA non-coding upstream 147130 25521656 ~ 25521931 (+)
G125926 NA non-coding downstream 364 25671258 ~ 25716956 (+)
G125930 LOC106605503 non-coding downstream 4037 25674931 ~ 25732039 (+)
G125957 NA non-coding downstream 56413 25727307 ~ 25784903 (+)
G125997 NA non-coding downstream 155305 25826199 ~ 25833719 (+)
G126021 NA non-coding downstream 194796 25865690 ~ 25866121 (+)
G124451 LOC106578403 other upstream 795227 24873051 ~ 24873834 (+)
LOC110538915 LOC106605649 other upstream 1124835 24540963 ~ 24544247 (+)
G124121 LOC106605585 other upstream 1520468 24146861 ~ 24148593 (+)
LOC110538497 LOC106605627 other upstream 1787425 23861576 ~ 23881639 (+)
G125934 NA other downstream 11986 25682880 ~ 25757853 (+)
G126387 LOC105417071 other downstream 378956 26049850 ~ 26050104 (+)
G126727 LOC106581475 other downstream 955955 26626849 ~ 26628649 (+)
G127190 cf113 other downstream 1123316 26794210 ~ 26795762 (+)
G127198 LOC106605538 other downstream 1186804 26857698 ~ 26861242 (+)

Expression


Co-expression Network