G126290


Basic Information

Item Value
gene id G126290
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 25973457 ~ 25975612 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU145797
TGTGCCACAAATTCCTTTCTGAATATCTACGTTCTCATAAAATATGATTCCCATTGTGAATAACCATATTCTGCGACGCTGAGAACATTTACAAGCACTGAAGGAATATATTCCAGCAATAAAGCAGAAAAACCTTCACAGGTATCCACAGCTATCACTTATCTTCTCATCGCCCACACCACAATTCAAGAAACTTTAAGCTTTACATAAAATAACAATTTTCTCAGGGATATGAGAAGCTAACTTACATCACCTTACATGTATGCATAGATTTGAATCGTGATGCCAGACATTGAGGATAGGTTccagaggaggctgctgagggacggctcataataatggctggaacggagtatGGAATGGCATcatatggaaaccatgtttttgatggtttttaattatttatttatttttaattttacccctttttctccccaatttcgtggtatccaattgttgtagtagcttgtctcattgctacaactccagtacgggctcgggagagacgaaggctgaatgtcatgcgtcctccgatacacaacccaaccagccgtactgcttcttaacacagcgcatccaacccggaagccagctgcaccaatggctacaccgtgcacctggcaaccttggctagcgcgcactgcgcccggcctgccacaggagtcgctggtgcgcgatgaggcaaggagatccctaccgaccaatccctccctaacccggacaacgctaggccaattgtgcgtcgccccacggacctcccggtcggttacgacagagcctgggcgcgaacccagggactctgatggcacagctggcgctgcagtacagcgcccttaaccactgcgccacccgggaggctgttTTTGATGTTTTTAATACCATTCCAACATTCCCGCTCCAGCCATTGCCACGAGTCCTTAGTTAAAGTGCCACCAACATCCTGTGATTGGTTCAGAAAAACAATTTGGTGATTTTGGTTCATTTTGTTCCTTTTCTCAGCAAGGTAcaaattaaaaaacaaaataaaaaagctTGGTACAATGATTCAGCAAGACTAacagaaaataacaataataaaacaCTTCAGATTTGTGTATGCATGCGATGAGTTAAGAGCTAAAGCCCACTGATGCCGGGGGATTGTGAGGGAAGAGTGATAAAGAAGGATGTATGACGTTGGAAGCAGAAAAGGCTAGGAGCTGACAGTGAAGCTGCACACTGAAGAGTCTTACCCATCTTTTCAGAGAACTCAGTAATAGCACACACATACAGCCCAGAGGAGAAATCAGAGAGATGATAATCACCCCTCTGAGAGATTAATTAAGTCTATTTATTACTATCTCTAAATAAGCCTTCCTGGAAAATATGTAACAGGATGAGACATTTGGAGGGAATGGAGGGAAAGTGGTTGACTCTACTGCCAATTGATTGGCCAGAGGGTGAGTGCTTCAGGCGATCAACAAACATGTAATTTATGTCACATGTTCCACTCTTTACACTCAGATCATGGCAGATAGAGATGTTTGTGTGCAAGTGTGCCTGTGTTTGCATAGCAAGAGTAAAATGATAGTAAAATAGGACTATGAAAAAAGCTGTGAATCATATTTTAAAGTACTGTTGGTTTTTTTCATACCATTTGATACATTTTTGTCTAATGATCATTTATAAGTACTACACAACATTTTAATATCATACTTCATAGATACAGTAGCATCAGATAAATATGATCCagtgtttaaaaaacaaaaacaagttaACAAACACAGAGGAAAACAGGGTAAAGTAAGTGGATACATCAACAGCTCTGGGTGACACCACACCTGAAGCTTCTCTTCCATGATTGGCTGGTTGGCTGCCACAGTTAGGTACAGTATAAATGAGCCACAGTAGACTAGTATGCCATTCACTTGAAGATGGTAATAGAAGTACCAGCtattcccccccacacacacacacacatatacctgCGCACACCAAATATCTAACTATATAACCAAGGAGGGACAGCCATGACGAAGTAGAGGTGTTGGTGTGGGGCAGGCCCCTCCTGCTCTGAGACAGCTGGTACAGGTCAGGGATCAGGTGGTCAGGTGGGGCAGAAGCAGCGAGGTCACAGCATTATGACAGCGGCTAcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU145797 True 2135 lncRNA 0.44 2 25973457 25975612

Neighbor

gene id symbol gene type direction distance location
LOC110539098 LOC106605503 coding downstream 183198 25669026 ~ 25790259 (-)
si:ch211-198c19.1 LOC106605502 coding downstream 512575 25459554 ~ 25460882 (-)
LOC110539072 cep162 coding downstream 529941 25428983 ~ 25443516 (-)
LOC110533704 cep162 coding downstream 545758 25417440 ~ 25427699 (-)
LOC110538828 grik2 coding downstream 862874 24862906 ~ 25110583 (-)
LOC110539162 LOC106605511 coding upstream 575220 26550832 ~ 26559134 (-)
LOC118938772 cg024 coding upstream 601341 26576953 ~ 26579337 (-)
ggctb ggct coding upstream 610179 26585791 ~ 26588645 (-)
LOC110539269 LOC106579366 coding upstream 653964 26629576 ~ 26640996 (-)
LOC110539285 LOC106579350 coding upstream 666346 26641958 ~ 26675649 (-)
G126161 NA non-coding downstream 126207 25743810 ~ 25847250 (-)
G126198 NA non-coding downstream 145928 25825981 ~ 25827529 (-)
G126159 NA non-coding downstream 233733 25739100 ~ 25739724 (-)
G126099 NA non-coding downstream 344298 25628958 ~ 25629159 (-)
G126096 NA non-coding downstream 350667 25622487 ~ 25622790 (-)
G126297 NA non-coding upstream 8446 25984058 ~ 25984291 (-)
G126320 NA non-coding upstream 26487 26002099 ~ 26002320 (-)
G126327 NA non-coding upstream 29135 26004747 ~ 26005163 (-)
G126381 NA non-coding upstream 66280 26041892 ~ 26042096 (-)
G126386 NA non-coding upstream 73746 26049358 ~ 26049596 (-)
G125305 NA other downstream 1196830 24775220 ~ 24776627 (-)
LOC110538887 LOC106605647 other downstream 1438928 24531424 ~ 24540898 (-)
G125043 NA other downstream 1648621 24324580 ~ 24324836 (-)
G125003 NA other downstream 1703321 24269226 ~ 24270136 (-)
LOC110538705 LOC106577653 other downstream 1812014 24144519 ~ 24172836 (-)
G127083 NA other upstream 586002 26561614 ~ 26562127 (-)
LOC110485245 ubr5 other upstream 1295648 27231538 ~ 27278158 (-)
G129250 NA other upstream 1790545 27766157 ~ 27766532 (-)
LOC110485663 LOC106579570 other upstream 2121070 27933389 ~ 28149986 (-)

Expression


Co-expression Network