G126341


Basic Information

Item Value
gene id G126341
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 26015816 ~ 26016025 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU145848
gccttacacatctctctctgggACTTTTTACTGCCACACTCAATCACAGGCCTAGAGATAATACTACAGAACAATTACAGTAGAGGACATTATGTGGATTCCCTGCATTTGAGTGTGGGTTTATTACATACATTACTTATGGTGTTTCATAGAAAATATACTGAGAGATTTCaactggagagaagagagacaccCTTCGTTGCCTGGTGC

Function

NR:

description
PREDICTED: F-box/LRR-repeat protein 3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU145848 True 210 lncRNA 0.41 1 26015816 26016025

Neighbor

gene id symbol gene type direction distance location
tsnare1 LOC106605505 coding upstream 40939 25831403 ~ 25974877 (+)
LOC110539045 mrap2 coding upstream 601441 25403433 ~ 25414375 (+)
LOC110534557 LOC106605501 coding upstream 619482 25377221 ~ 25396334 (+)
LOC110534548 LOC106579462 coding upstream 690160 25294643 ~ 25325656 (+)
ascc3 ascc3 coding upstream 724292 25151016 ~ 25291524 (+)
LOC110539113 LOC106605506 coding downstream 83118 26099143 ~ 26113953 (+)
cdk14 LOC106605507 coding downstream 107688 26123713 ~ 26330981 (+)
fzd1 LOC106605515 coding downstream 306982 26323007 ~ 26326895 (+)
LOC110539173 LOC106605512 coding downstream 436656 26452681 ~ 26547503 (+)
LOC110539182 LOC106605509 coding downstream 563733 26579758 ~ 26581796 (+)
G126021 NA non-coding upstream 149695 25865690 ~ 25866121 (+)
G125997 NA non-coding upstream 182097 25826199 ~ 25833719 (+)
G125957 NA non-coding upstream 230913 25727307 ~ 25784903 (+)
G125930 LOC106605503 non-coding upstream 283777 25674931 ~ 25732039 (+)
G125926 NA non-coding upstream 298860 25671258 ~ 25716956 (+)
G126375 NA non-coding downstream 21604 26037629 ~ 26038230 (+)
G126418 NA non-coding downstream 72207 26088232 ~ 26093529 (+)
G126397 NA non-coding downstream 101962 26117987 ~ 26118323 (+)
G126396 NA non-coding downstream 103783 26119808 ~ 26120179 (+)
G125934 NA other upstream 257963 25682880 ~ 25757853 (+)
G124451 LOC106578403 other upstream 1141982 24873051 ~ 24873834 (+)
LOC110538915 LOC106605649 other upstream 1471590 24540963 ~ 24544247 (+)
G124121 LOC106605585 other upstream 1867223 24146861 ~ 24148593 (+)
G126387 LOC105417071 other downstream 33825 26049850 ~ 26050104 (+)
G126727 LOC106581475 other downstream 610824 26626849 ~ 26628649 (+)
G127190 cf113 other downstream 778185 26794210 ~ 26795762 (+)
G127198 LOC106605538 other downstream 841673 26857698 ~ 26861242 (+)
LOC110485212 LOC106605536 other downstream 1132151 27147880 ~ 27175747 (+)

Expression


Co-expression Network