G126387 (LOC105417071)


Basic Information

Item Value
gene id G126387
gene name LOC105417071
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 26049850 ~ 26050104 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU145896
CTACCATGTTTTCCAAGTTGGACCTTCGGAATGCCTACCAGCTGGTTCGAATACTCGagggtgatgagtggaagacagccttcaacacagccagtggacattatgagtaccaggtcatgccaTTTGGACTCACCAACGTCCCCGCTGTCTTCGAGGCTTTGGTCAATGATATGCTTCGGGACATGCTAAACCGGTTTGTGTCCGTCTACCTGGACGataacctgttttttttttccatatctgaaaggtgaaagc

Function

NR:

description
PREDICTED: RNA-directed DNA polymerase homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU145896 True 255 TUCP 0.48 1 26049850 26050104

Neighbor

gene id symbol gene type direction distance location
tsnare1 LOC106605505 coding upstream 74973 25831403 ~ 25974877 (+)
LOC110539045 mrap2 coding upstream 635475 25403433 ~ 25414375 (+)
LOC110534557 LOC106605501 coding upstream 653516 25377221 ~ 25396334 (+)
LOC110534548 LOC106579462 coding upstream 724194 25294643 ~ 25325656 (+)
ascc3 ascc3 coding upstream 758326 25151016 ~ 25291524 (+)
LOC110539113 LOC106605506 coding downstream 49039 26099143 ~ 26113953 (+)
cdk14 LOC106605507 coding downstream 73609 26123713 ~ 26330981 (+)
fzd1 LOC106605515 coding downstream 272903 26323007 ~ 26326895 (+)
LOC110539173 LOC106605512 coding downstream 402577 26452681 ~ 26547503 (+)
LOC110539182 LOC106605509 coding downstream 529654 26579758 ~ 26581796 (+)
G126375 NA non-coding upstream 11620 26037629 ~ 26038230 (+)
G126341 NA non-coding upstream 33825 26015816 ~ 26016025 (+)
G126021 NA non-coding upstream 183729 25865690 ~ 25866121 (+)
G125997 NA non-coding upstream 216131 25826199 ~ 25833719 (+)
G125957 NA non-coding upstream 264947 25727307 ~ 25784903 (+)
G126418 NA non-coding downstream 38128 26088232 ~ 26093529 (+)
G126397 NA non-coding downstream 67883 26117987 ~ 26118323 (+)
G126396 NA non-coding downstream 69704 26119808 ~ 26120179 (+)
G126543 NA non-coding downstream 282914 26333018 ~ 26333224 (+)
G125934 NA other upstream 291997 25682880 ~ 25757853 (+)
G124451 LOC106578403 other upstream 1176016 24873051 ~ 24873834 (+)
LOC110538915 LOC106605649 other upstream 1505624 24540963 ~ 24544247 (+)
G124121 LOC106605585 other upstream 1901257 24146861 ~ 24148593 (+)
G126727 LOC106581475 other downstream 576745 26626849 ~ 26628649 (+)
G127190 cf113 other downstream 744106 26794210 ~ 26795762 (+)
G127198 LOC106605538 other downstream 807594 26857698 ~ 26861242 (+)
LOC110485212 LOC106605536 other downstream 1098072 27147880 ~ 27175747 (+)
G127644 LOC106605534 other downstream 1139887 27189991 ~ 27190593 (+)

Expression


Co-expression Network