Gene
RNA
| Item | Value |
|---|---|
| gene id | G126775 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 26104122 ~ 26113943 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| pituitary tumor-transforming gene 1 protein-interacting protein-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU146319 | True | 587 | lncRNA | 0.39 | 3 | 26104122 | 26113943 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110539098 | LOC106605503 | coding | downstream | 313863 | 25669026 ~ 25790259 (-) |
| si:ch211-198c19.1 | LOC106605502 | coding | downstream | 643240 | 25459554 ~ 25460882 (-) |
| LOC110539072 | cep162 | coding | downstream | 660606 | 25428983 ~ 25443516 (-) |
| LOC110533704 | cep162 | coding | downstream | 676423 | 25417440 ~ 25427699 (-) |
| LOC110538828 | grik2 | coding | downstream | 993539 | 24862906 ~ 25110583 (-) |
| LOC110539162 | LOC106605511 | coding | upstream | 436889 | 26550832 ~ 26559134 (-) |
| LOC118938772 | cg024 | coding | upstream | 463010 | 26576953 ~ 26579337 (-) |
| ggctb | ggct | coding | upstream | 471848 | 26585791 ~ 26588645 (-) |
| LOC110539269 | LOC106579366 | coding | upstream | 515633 | 26629576 ~ 26640996 (-) |
| LOC110539285 | LOC106579350 | coding | upstream | 528015 | 26641958 ~ 26675649 (-) |
| G126386 | NA | non-coding | downstream | 54526 | 26049358 ~ 26049596 (-) |
| G126381 | NA | non-coding | downstream | 62026 | 26041892 ~ 26042096 (-) |
| G126327 | NA | non-coding | downstream | 98959 | 26004747 ~ 26005163 (-) |
| G126320 | NA | non-coding | downstream | 101802 | 26002099 ~ 26002320 (-) |
| G126297 | NA | non-coding | downstream | 119831 | 25984058 ~ 25984291 (-) |
| G126890 | NA | non-coding | upstream | 179336 | 26293279 ~ 26320696 (-) |
| G126928 | NA | non-coding | upstream | 217853 | 26331796 ~ 26331999 (-) |
| G126929 | NA | non-coding | upstream | 218085 | 26332028 ~ 26332285 (-) |
| G126930 | NA | non-coding | upstream | 219169 | 26333112 ~ 26333341 (-) |
| G126934 | NA | non-coding | upstream | 224655 | 26338598 ~ 26338831 (-) |
| G125305 | NA | other | downstream | 1327495 | 24775220 ~ 24776627 (-) |
| LOC110538887 | LOC106605647 | other | downstream | 1569593 | 24531424 ~ 24540898 (-) |
| G125043 | NA | other | downstream | 1779286 | 24324580 ~ 24324836 (-) |
| G125003 | NA | other | downstream | 1833986 | 24269226 ~ 24270136 (-) |
| LOC110538705 | LOC106577653 | other | downstream | 1942679 | 24144519 ~ 24172836 (-) |
| G127083 | NA | other | upstream | 447671 | 26561614 ~ 26562127 (-) |
| LOC110485245 | ubr5 | other | upstream | 1157317 | 27231538 ~ 27278158 (-) |
| G129250 | NA | other | upstream | 1652214 | 27766157 ~ 27766532 (-) |
| LOC110485663 | LOC106579570 | other | upstream | 1982739 | 27933389 ~ 28149986 (-) |
