G126546


Basic Information

Item Value
gene id G126546
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 26339562 ~ 26339896 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU146059
atcccatactgtatttatttatttatttatctttctcctttgcaccccagtatctctacttgcacattcatcttctgcacatctatcactccattgtttaattggtatattgtaattactttgccaccatggcctatttattgccttacctcccttatcttacctcatttgcacacactctatatagactttttctactttattattgactgtatgtttgtttactccatgtgtaactctgtgttgttgtatgtgtagaactgctttgctttatcttggccaggtcgcagttgtaaatgagaacttgttctcaactaacctacctggttaaataa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU146059 True 335 lncRNA 0.35 1 26339562 26339896

Neighbor

gene id symbol gene type direction distance location
cdk14 LOC106605507 coding upstream 8581 26123713 ~ 26330981 (+)
fzd1 LOC106605515 coding upstream 12667 26323007 ~ 26326895 (+)
LOC110539113 LOC106605506 coding upstream 225609 26099143 ~ 26113953 (+)
tsnare1 LOC106605505 coding upstream 364685 25831403 ~ 25974877 (+)
LOC110539045 mrap2 coding upstream 925187 25403433 ~ 25414375 (+)
LOC110539173 LOC106605512 coding downstream 112785 26452681 ~ 26547503 (+)
LOC110539182 LOC106605509 coding downstream 239862 26579758 ~ 26581796 (+)
LOC110539212 LOC106605509 coding downstream 241872 26581768 ~ 26585441 (+)
LOC110539196 LOC106605517 coding downstream 256369 26596265 ~ 26613437 (+)
trnar-acg-2 NA coding downstream 301271 26641167 ~ 26641239 (+)
G126548 NA non-coding upstream 1205 26338068 ~ 26338357 (+)
G126545 NA non-coding upstream 3582 26335557 ~ 26335980 (+)
G126543 NA non-coding upstream 6338 26333018 ~ 26333224 (+)
G126396 NA non-coding upstream 219383 26119808 ~ 26120179 (+)
G126549 NA non-coding downstream 21 26339917 ~ 26340149 (+)
G126561 NA non-coding downstream 19302 26359198 ~ 26359582 (+)
G126607 NA non-coding downstream 120543 26460439 ~ 26478507 (+)
G126641 NA non-coding downstream 123588 26463484 ~ 26464923 (+)
G126658 NA non-coding downstream 162912 26502808 ~ 26542017 (+)
G126387 LOC105417071 other upstream 289458 26049850 ~ 26050104 (+)
G125934 NA other upstream 581709 25682880 ~ 25757853 (+)
LOC110534557 LOC106605501 other upstream 957250 25377221 ~ 25396334 (+)
G124451 LOC106578403 other upstream 1465728 24873051 ~ 24873834 (+)
LOC110538915 LOC106605649 other upstream 1795336 24540963 ~ 24544247 (+)
G126727 LOC106581475 other downstream 286953 26626849 ~ 26628649 (+)
G127190 cf113 other downstream 454314 26794210 ~ 26795762 (+)
G127198 LOC106605538 other downstream 517802 26857698 ~ 26861242 (+)
LOC110485212 LOC106605536 other downstream 808280 27147880 ~ 27175747 (+)
G127644 LOC106605534 other downstream 850095 27189991 ~ 27190593 (+)

Expression


Co-expression Network