G126680


Basic Information

Item Value
gene id G126680
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 26526699 ~ 26527002 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU146207
aCAGCCAGCTCTGTGTTTCTACCTCGcctcttctctactctcctctctcagcaccactctgaCAGCCTGCTCTGTGGGtttacctctcctcttctctactctcctctctcagcaccactctgaCAGCCTGCTCTGTGTTTctacctctcctgtcctgtcctctcctctcctctctcagcaccactctgaCAGCCTGCTCTGTGTTTctacctctcctgtcctctcctcttctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU146207 True 233 lncRNA 0.38 2 26526699 26527002

Neighbor

gene id symbol gene type direction distance location
cdk14 LOC106605507 coding upstream 195718 26123713 ~ 26330981 (+)
fzd1 LOC106605515 coding upstream 199804 26323007 ~ 26326895 (+)
LOC110539113 LOC106605506 coding upstream 412746 26099143 ~ 26113953 (+)
tsnare1 LOC106605505 coding upstream 551822 25831403 ~ 25974877 (+)
LOC110539045 mrap2 coding upstream 1112324 25403433 ~ 25414375 (+)
LOC110539182 LOC106605509 coding downstream 52756 26579758 ~ 26581796 (+)
LOC110539212 LOC106605509 coding downstream 54766 26581768 ~ 26585441 (+)
LOC110539196 LOC106605517 coding downstream 69263 26596265 ~ 26613437 (+)
trnar-acg-2 NA coding downstream 114165 26641167 ~ 26641239 (+)
LOC110485091 LOC106605521 coding downstream 211922 26738924 ~ 26741780 (+)
G126607 NA non-coding upstream 48192 26460439 ~ 26478507 (+)
G126641 NA non-coding upstream 61776 26463484 ~ 26464923 (+)
G126561 NA non-coding upstream 167117 26359198 ~ 26359582 (+)
G126549 NA non-coding upstream 186550 26339917 ~ 26340149 (+)
G126546 NA non-coding upstream 186803 26339562 ~ 26339896 (+)
G126664 LOC106579390 non-coding downstream 31014 26558016 ~ 26558636 (+)
G126694 NA non-coding downstream 34496 26561498 ~ 26562008 (+)
G126695 NA non-coding downstream 36045 26563047 ~ 26563342 (+)
G126748 NA non-coding downstream 133010 26660012 ~ 26661367 (+)
G127165 LOC106605523 non-coding downstream 233440 26760442 ~ 26761528 (+)
G126387 LOC105417071 other upstream 476595 26049850 ~ 26050104 (+)
G125934 NA other upstream 768846 25682880 ~ 25757853 (+)
LOC110534557 LOC106605501 other upstream 1144387 25377221 ~ 25396334 (+)
G124451 LOC106578403 other upstream 1652865 24873051 ~ 24873834 (+)
LOC110538915 LOC106605649 other upstream 1982473 24540963 ~ 24544247 (+)
G126727 LOC106581475 other downstream 99847 26626849 ~ 26628649 (+)
G127190 cf113 other downstream 267208 26794210 ~ 26795762 (+)
G127198 LOC106605538 other downstream 330696 26857698 ~ 26861242 (+)
LOC110485212 LOC106605536 other downstream 621174 27147880 ~ 27175747 (+)
G127644 LOC106605534 other downstream 662989 27189991 ~ 27190593 (+)

Expression


Co-expression Network