G127051


Basic Information

Item Value
gene id G127051
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 26543904 ~ 26547502 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU146612
AAAGTTTTGCTCTTTTAATTTCATATTCTGTACACATTTTTACATAAATGGAAtgttataacatactgtatgtctaaaTAGTTTCTAAAATAACATTTCTAGGTATGTACTGTCAGCCTGTCTCTGAAGTACCTTGGGAGGTATAACCCAAATAAAAATAGTTTCCTTCACCTCTCAACTATTACATGAATGCCCTACTACACCTCCACCTTCATTCAAGCAAGCTCATCCCCAACTAATAATCATCTACAGTATGTTCGCTGTCATGGTATATTATAGTATCATGAACAGAACATCAAGTATAGCTACCTGATGACATGTGTGTTCTCTAACGCATCTCGCATTCATATATGTTGACAGTTTTAAACACTGCATCCTCACAAGTCCATCCATACGGAGCTTTTCAACACGTAGATTTGGATAGACATCGATCCGATTGGATCGATATGGGCTCAAATTGGCAACTGTAGCATAAGCAGCAAAACCAAAACATTTACACAAAATGACCATATAAGCCCCCCTCCTTTACCACTGGCCTGACATCCAAACTGAATTCTCTACAGTAAAAACATAACGAAATCAGTTTAGGTGCTAGGCTGCCTCCCCACTCGCCCCCCAAAGAAACCCAAACATCCAAAAGACTAACAAAACTGAAATGGGGGTCAAATGTGATTTAAACTGATTCTAGCTACAGTAGATCATAGAAGGCTGTTCTGGTAGGCTAGCTAGGGAGGATCCTCGTGCTACACACATACCCATGACAATAAGGGCATATTGTACACATACGTGAGTCATTCGACAACATTTAAAAATCACATTGCTTACAGTACAGTAGCCATGGGACAAACCATGCGGTGAGACCAGACATTCTAGTTTCAGACCAGACATTATAGTTTCTCCTTCACTGATGTGCAATGAGGAGAAACTCCCATCTGGATTTAGATCAAACTTTATTAGCTATAGTACATGATGACAAATGGGGAAACAGTCCATTTGGGTGGGGGCTTTTTATTGTCCAATTCCAAAGagctgtatgcctcgctgtactGTATAAAGTGTTAGCAGCACGTCTTAGAGGCATGACGATGGCCCTTTTGGAGAAACCAGTTAATATGGTGTAACTGACCCAGTAGCCATGGTAACACTATCTTTAGTATATCCATACCATAATACCCAGATCCCCTATAAATGCTCTTTATTAATTTGTCTGACTGGTCGTTACTAGTTTGAATTGGGCAACCAATATAAATACTATTGATCTTATTCCTAGATCTGTCATaataatatactataatctaAAATCTCTAAACTGTGGAGATTGAAAAACCTCCACAATGATTGTGAAAAGCATAGCCATTTAAAAGCCTTTTGTCTAATTCATTGAATTTGTCTATCAGTTTCTTACTCTGCCCTTATTCGCAGCCCAATGGTGAAGATGGAGGTCTAGTATACTGGTATACTAATTAGCAGCGCATCCTGGGAAAGCTCTCACAACATTAAAGAGAACAACATCAAGGCCTTGTTTAAATATTACAACCCAGGGTTGCTGGAAGCTGAAATGTATTAGATAAGAAATGTGTAAAACACTCAAACACACTGAGAAAGTGGATCCAACATTCTAATGATACCTTTTTTGAATATATCAGTCTTCCCCTTATTCTGATTGGCTTTGGCATGGAGCTCCACCAATCGCCTACTTCCTGCCCCGCCATCTCACCTCTACTGTGATAGGCTGATTGGTAGATGATTATGATTGGGTAAAAAGTGTGCAATCTCAGGCAGCTATTTGAAACAGCACTGAAATGGACAAACATGAATAGAAGTCATAGTTATTCATGTCATTCTCTTTGCATTAAGGCCCAACTTAGTTTCACTATaactcatacatacatacacagataTGCAATTACACCATTATGTCAAATCTGCACACTTAAAATAATTTGCATAATAATAACTGATAAGTCTCATGATGATAAATAAAGATTAAAAGtaaaagtgagtgagtgagagaagagGATGGGTGTGTGAACCCTGTAGAAGGCTAGAGTATATACACCACATAATGTCAACGGGCCCCTGGGGGAGGGGGATATCTGTTCTGGGGTCAGCACATTGTAGCCTGGATCCCAACTGAATTGATCCTCTTCACAATTGCCAAACTGAAGATGCACAGTAAACCAATTGTGAAACATAGTAATTCCGTTGGGATCCAGGCTAAGCACAGAGGGCCTCATGTCCCAGACAGACAGCTATTGCTGCTACAAAAACTAAGATTAACGTTCTCACTTCAGAGAAGTGCCTGCTGGGAGTTGTAGTTGCTACTAGCTGAGCCACGCACTTCTGGTAGCACAGTCCAGTTCACGTCTTGTTGCTACCACAGAGGCATTGAGGGGTTGTGAGTTAGATAGCTAGTCAAGGGAAAGGagatagtgagaaagagagagagggacagcatATTGCAGGGCACTTCTAATTTCAGTGTGGCTAGCAGCCAGGGCCAGCTCCAGTCATGTCCCAGTGGAGTAAAGGGTAGAGATAAGCAGAGTTTCACATTCAGCTGAGTCGAGCTCTCTgctgggtctctctctgtctgtcgtcaTCCAGTCATCCAACACACAGGGGGAAGGGCTAGGGAGGGAGGATATAGTATAGACTCATACCTGACTTCCCACCCTCTGTCCCCAACCCACCAATcgcactgttctgttctgttctgttgtcttGACTCTGCCCTGGTAGGCCATTAGGATCTGAAGGTGAAGGCACTGGTAGACACAGTTGGTgaggagggggaaagggggggatGAGGACTGACTTCCCCTTGCCCCTTCTCCCCTCAGCTTGCTCCCCGAAATGTCCAGGTGTACAATCACTCAGACCAAACAGATGGGAGGAGACCTGGATCTACTGTCCAATAACACAGGAGGAGGGAATTCCAAGTCACAGCAGCCCTGGAGCTCAGCCAACCAAAGCAGCTCAATCACTGGGGCATGGCCAATGGGATGAAATGCAAAACGTCTGTGGGTGGCATATACAGCCGTTTCATTGATgcggcagagagtgagagggcgTGTTGAGAGCAACAGTTTTTCCTGATTGGATAGTTGTGCAACAGAGGTGTTTTGTCTTCCCCTCAACATCAGGTTGGCAGATAagcatgtatgtctgtctgtcggtctgtctgtctgtctttgaggACAAAGCAGAGGTTggttgtgtttgtgagtgtgtatttgtgagtttgtgtgtctgtgtctgtctggtcttGTCTCGGAGCCGATTGCGTGTGTGTGGAGATAAATAGATAGATCAGCATTAAATGTAGTTTCCCTGAAGATTGCTTTTAATGAGTTTTGGCACACTGCGGTTCTTGACTGGTTTGAGTTGAGGTGTGTTGAGGGCTGAGGTACTGGAGGTGATGGGGATAGAGGGGTAGGGTCAGGGTGAGGTGTCAGTTCTGTACTGGCCACAGAGTCACAGTGTGTCTGTCCAGTAGTCTCATTGGCAACGTGGAAGGGGAGGGGATTCACATTAAGGAATTTTGTTATTGGAGCAGATCACTCTTCTTAACGAGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU146612 True 3579 lncRNA 0.47 2 26543904 26547502

Neighbor

gene id symbol gene type direction distance location
LOC110539098 LOC106605503 coding downstream 753645 25669026 ~ 25790259 (-)
si:ch211-198c19.1 LOC106605502 coding downstream 1083022 25459554 ~ 25460882 (-)
LOC110539072 cep162 coding downstream 1100388 25428983 ~ 25443516 (-)
LOC110533704 cep162 coding downstream 1116205 25417440 ~ 25427699 (-)
LOC110538828 grik2 coding downstream 1433321 24862906 ~ 25110583 (-)
LOC110539162 LOC106605511 coding upstream 3330 26550832 ~ 26559134 (-)
LOC118938772 cg024 coding upstream 29451 26576953 ~ 26579337 (-)
ggctb ggct coding upstream 38289 26585791 ~ 26588645 (-)
LOC110539269 LOC106579366 coding upstream 82074 26629576 ~ 26640996 (-)
LOC110539285 LOC106579350 coding upstream 94456 26641958 ~ 26675649 (-)
G126992 NA non-coding downstream 105649 26436470 ~ 26438255 (-)
G126944 NA non-coding downstream 184268 26359141 ~ 26359636 (-)
G126934 NA non-coding downstream 205073 26338598 ~ 26338831 (-)
G126930 NA non-coding downstream 210563 26333112 ~ 26333341 (-)
G126929 NA non-coding downstream 211619 26332028 ~ 26332285 (-)
G127084 NA non-coding upstream 14894 26562396 ~ 26562728 (-)
G127085 NA non-coding upstream 16590 26564092 ~ 26564332 (-)
G127080 NA non-coding upstream 78664 26626166 ~ 26626619 (-)
G127074 NA non-coding upstream 79191 26626693 ~ 26628603 (-)
G125305 NA other downstream 1767277 24775220 ~ 24776627 (-)
LOC110538887 LOC106605647 other downstream 2009375 24531424 ~ 24540898 (-)
G125043 NA other downstream 2219068 24324580 ~ 24324836 (-)
G125003 NA other downstream 2273768 24269226 ~ 24270136 (-)
LOC110538705 LOC106577653 other downstream 2382461 24144519 ~ 24172836 (-)
G127083 NA other upstream 14112 26561614 ~ 26562127 (-)
LOC110485245 ubr5 other upstream 723758 27231538 ~ 27278158 (-)
G129250 NA other upstream 1218655 27766157 ~ 27766532 (-)
LOC110485663 LOC106579570 other upstream 1549180 27933389 ~ 28149986 (-)

Expression


Co-expression Network