G126694


Basic Information

Item Value
gene id G126694
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 26561498 ~ 26562008 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU146223
gaaaaattgggcgtgcaaaattattcagcccccttaagttaatactttgtagcgccaccttttgctgcgattacagctgtaagtcgcttggggtatgtctctatcagttttgcacaacgagagactgacattttttcccattcctccttgcaaaacagctcgagctcagtgagggtggatggagagcatttgtgaacagcagttttaagttctttccacagattctcgattggattcaggtctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaagggtcctgtatttggctccatccatcttcccatcaattttaacaatcttccctgtccctgctgaagaaaagcaggcccaaaccatgatgctgccaccaccatgtttgacag

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU146223 True 511 lncRNA 0.44 1 26561498 26562008

Neighbor

gene id symbol gene type direction distance location
LOC110539173 LOC106605512 coding upstream 13995 26452681 ~ 26547503 (+)
cdk14 LOC106605507 coding upstream 230517 26123713 ~ 26330981 (+)
fzd1 LOC106605515 coding upstream 234603 26323007 ~ 26326895 (+)
LOC110539113 LOC106605506 coding upstream 447545 26099143 ~ 26113953 (+)
tsnare1 LOC106605505 coding upstream 586621 25831403 ~ 25974877 (+)
LOC110539182 LOC106605509 coding downstream 17750 26579758 ~ 26581796 (+)
LOC110539212 LOC106605509 coding downstream 19760 26581768 ~ 26585441 (+)
LOC110539196 LOC106605517 coding downstream 34257 26596265 ~ 26613437 (+)
trnar-acg-2 NA coding downstream 79159 26641167 ~ 26641239 (+)
LOC110485091 LOC106605521 coding downstream 176916 26738924 ~ 26741780 (+)
G126664 LOC106579390 non-coding upstream 2862 26558016 ~ 26558636 (+)
G126658 NA non-coding upstream 19481 26502808 ~ 26542017 (+)
G126679 NA non-coding upstream 34462 26525778 ~ 26527036 (+)
G126680 NA non-coding upstream 34496 26526699 ~ 26527002 (+)
G126607 NA non-coding upstream 82991 26460439 ~ 26478507 (+)
G126695 NA non-coding downstream 1039 26563047 ~ 26563342 (+)
G126748 NA non-coding downstream 98004 26660012 ~ 26661367 (+)
G127165 LOC106605523 non-coding downstream 198434 26760442 ~ 26761528 (+)
G127188 NA non-coding downstream 230020 26792028 ~ 26792291 (+)
G127202 NA non-coding downstream 263304 26825312 ~ 26825904 (+)
G126387 LOC105417071 other upstream 511394 26049850 ~ 26050104 (+)
G125934 NA other upstream 803645 25682880 ~ 25757853 (+)
LOC110534557 LOC106605501 other upstream 1179186 25377221 ~ 25396334 (+)
G124451 LOC106578403 other upstream 1687664 24873051 ~ 24873834 (+)
LOC110538915 LOC106605649 other upstream 2017272 24540963 ~ 24544247 (+)
G126727 LOC106581475 other downstream 64841 26626849 ~ 26628649 (+)
G127190 cf113 other downstream 232202 26794210 ~ 26795762 (+)
G127198 LOC106605538 other downstream 295690 26857698 ~ 26861242 (+)
LOC110485212 LOC106605536 other downstream 586168 27147880 ~ 27175747 (+)
G127644 LOC106605534 other downstream 627983 27189991 ~ 27190593 (+)

Expression


Co-expression Network