G127080



Basic Information


Item Value
gene id G127080
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 26626166 ~ 26626619 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU146647
TGTCCGGTTTATTTTCCGAACTTTGATACACTATGCAAGGCTTTTAATGTTCCTCATAACATCTAATAGGATCACTTCTCATCAGCATCCTTGACTCAATTGGCTATGCGGTTTTGCCTTTTTGAAGAGTAATGGTCATTCTACAGGGTTGAAGATATGACAGCCTATCAGCTttataacagaactcattatatccattgtcctggtgtcatacaGTCAGcctacatctctctctatacataaTGTTTTCAATGAAATTATCCTCAAGGAGGAGATTAAGGAGTTGACATGCCAAGATCAGTCATGACATGTGAGGGGGATTTTTGCATACAACGAGGGATCAAGGATGGATTTTGGAACTAGGTGTTCATACTATAGTTTGAGGACATGCATGTCCAGCCTGCTTTAGCTGTAATTCCTATCATCTATATTAAGGTTTGTTTTAGAGTGAACA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU146647 True 454 lncRNA 0.39 1 26626166 26626619

Neighbor


gene id symbol gene type direction distance location
ggctb ggct coding downstream 37521 26585791 ~ 26588645 (-)
LOC118938772 cg024 coding downstream 46829 26576953 ~ 26579337 (-)
LOC110539162 LOC106605511 coding downstream 67032 26550832 ~ 26559134 (-)
LOC110539098 LOC106605503 coding downstream 835907 25669026 ~ 25790259 (-)
si:ch211-198c19.1 LOC106605502 coding downstream 1165284 25459554 ~ 25460882 (-)
LOC110539269 LOC106579366 coding upstream 2957 26629576 ~ 26640996 (-)
LOC110539285 LOC106579350 coding upstream 15339 26641958 ~ 26675649 (-)
lars2 lars2 coding upstream 56739 26683358 ~ 26726160 (-)
LOC110485094 LOC106605523 coding upstream 133766 26760385 ~ 26762634 (-)
LOC110485095 LOC106579313 coding upstream 155177 26781796 ~ 26786984 (-)
G127085 NA non-coding downstream 61834 26564092 ~ 26564332 (-)
G127084 NA non-coding downstream 63438 26562396 ~ 26562728 (-)
G127051 NA non-coding downstream 78664 26543904 ~ 26547502 (-)
G126992 NA non-coding downstream 187911 26436470 ~ 26438255 (-)
G126944 NA non-coding downstream 266530 26359141 ~ 26359636 (-)
G127074 NA non-coding upstream 74 26626693 ~ 26628603 (-)
G127131 NA non-coding upstream 57549 26684168 ~ 26684638 (-)
G127268 NA non-coding upstream 110222 26736841 ~ 26737779 (-)
G127307 NA non-coding upstream 194147 26820766 ~ 26822599 (-)
G127083 NA other downstream 64039 26561614 ~ 26562127 (-)
G125305 NA other downstream 1849539 24775220 ~ 24776627 (-)
LOC110538887 LOC106605647 other downstream 2091637 24531424 ~ 24540898 (-)
G125043 NA other downstream 2301330 24324580 ~ 24324836 (-)
G125003 NA other downstream 2356030 24269226 ~ 24270136 (-)
LOC110485245 ubr5 other upstream 644641 27231538 ~ 27278158 (-)
G129250 NA other upstream 1139538 27766157 ~ 27766532 (-)
LOC110485663 LOC106579570 other upstream 1470063 27933389 ~ 28149986 (-)
G129582 NA other upstream 1683700 28310319 ~ 28310732 (-)

Expression



Co-expression Network