G127165 (LOC106605523)


Basic Information

Item Value
gene id G127165
gene name LOC106605523
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 26760442 ~ 26761528 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU146749
CCTTCAGCAGACGCGCATGGGCCTCACTCAGGCCTCCTTTACTAGGACATTTCTTCAGCAAAAACTGCGGTAGAGTTCTAATCAAGTTTGATTACGACAATATAGCGCTACGCCTCCCTCACGTTCACATTGTTTTTAcaacttaaaaaataaaaaaagtctgCTTAGAAAAGGCAGGACAGGCTCAGGCTGCGGGTCATAGGCCCAGGTCGGGGCAGTCTTCAAGAGTCCTGATATGCAATGTCAGACCCTGGCGAGTTTCAAAACGTTTCTTACACAAGACAGCGATCCAGTTTCAGTTTGTGATTGCTCTTCCAGCAAAACCTCCTCATCCTCTGTGAAATACCACAGATGTAACAAGAAAGTGATCCTGTACTTGCAACATGAAAATGTAGTTGTTCTTTAAAACTTTCTACAGACTCAAAGGTTCTTCCGCAGATACCACACCGAGATAGCTGTGCATGTCTATGGGCATGAATCACTAGATCACTAGTGATAAGGTTTTGCACATATTCTACAATGACGAACAGCATTACTGGAGATAGGGGATTTCAGATGTGACAACAGACATGGAAGCTTGGTCCAGCTTTAGTCTGTGTTCTCTTTGACTTGAGTGGAGGTCCTTCACTCTCCATCCGATCAACACTTTCACCGCTCTCACTCTGAGTTTCAGACCAGTCTGAATTGACTGCAGAGGCGGGCTGAGAGTCACTGAAGAACTCCGTTTTAATCTCTTCAATTTGCGTTGTGGTGCTGGGTAGCTCATCCCTCTCTGTGTTTTCTTCACGTTGGGTTAAAATTTGGTAAAAATGTGAGGACTGATTTGGGTTCTGATTATAGTCACATTTTACTCTGGCAGTAGATATGAAGGCTTCTGTATCAGCAGAATCATCCGTATCATCAGTATCATAATCCATTGCTTGAAGCTGCTCTCGTCCCTGACTGATGACCCATAGGTCCTCCTGTTCCACTTTAATCTGGGAAGGGTCCTCCTGCCCCAGACCGGGACTACAATCCTGCTTGCAGTGCTGCTGCTCAAGGGGAACCTCCTcttcagagatg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU146749 True 1062 lncRNA 0.35 2 26760442 26761528

Neighbor

gene id symbol gene type direction distance location
LOC110485091 LOC106605521 coding upstream 18662 26738924 ~ 26741780 (+)
trnar-acg-2 NA coding upstream 119203 26641167 ~ 26641239 (+)
LOC110539196 LOC106605517 coding upstream 147005 26596265 ~ 26613437 (+)
LOC110539212 LOC106605509 coding upstream 175001 26581768 ~ 26585441 (+)
LOC110539182 LOC106605509 coding upstream 178646 26579758 ~ 26581796 (+)
rwdd1 rwdd1 coding downstream 8936 26770464 ~ 26779479 (+)
LOC110485096 LOC106605526 coding downstream 51956 26813484 ~ 26823336 (+)
LOC110485145 LOC106579269 coding downstream 136401 26897929 ~ 26903411 (+)
LOC110533712 NA coding downstream 143373 26904901 ~ 26909167 (+)
LOC110485187 LOC106605537 coding downstream 155867 26917395 ~ 26934478 (+)
G126748 NA non-coding upstream 99075 26660012 ~ 26661367 (+)
G126695 NA non-coding upstream 197100 26563047 ~ 26563342 (+)
G126694 NA non-coding upstream 198434 26561498 ~ 26562008 (+)
G126664 LOC106579390 non-coding upstream 201806 26558016 ~ 26558636 (+)
G126679 NA non-coding upstream 233406 26525778 ~ 26527036 (+)
G127188 NA non-coding downstream 30500 26792028 ~ 26792291 (+)
G127202 NA non-coding downstream 63784 26825312 ~ 26825904 (+)
G127209 NA non-coding downstream 66720 26828248 ~ 26828451 (+)
G127211 NA non-coding downstream 68667 26830195 ~ 26830696 (+)
G127216 NA non-coding downstream 72579 26834107 ~ 26855129 (+)
G126727 LOC106581475 other upstream 131793 26626849 ~ 26628649 (+)
G126387 LOC105417071 other upstream 710338 26049850 ~ 26050104 (+)
G125934 NA other upstream 1002589 25682880 ~ 25757853 (+)
LOC110534557 LOC106605501 other upstream 1378130 25377221 ~ 25396334 (+)
G124451 LOC106578403 other upstream 1886608 24873051 ~ 24873834 (+)
G127190 cf113 other downstream 32682 26794210 ~ 26795762 (+)
G127198 LOC106605538 other downstream 96170 26857698 ~ 26861242 (+)
LOC110485212 LOC106605536 other downstream 386648 27147880 ~ 27175747 (+)
G127644 LOC106605534 other downstream 428463 27189991 ~ 27190593 (+)
LOC110485466 LOC106605529 other downstream 540550 27288172 ~ 27303644 (+)

Expression


Co-expression Network