G127190 (cf113)


Basic Information

Item Value
gene id G127190
gene name cf113
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 26794210 ~ 26795762 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU146777
TTGGCAGTTACAAATTTACATTCACAGTAAAATGAATGCGACAACTGCATTCCAGCATCAAGGGATCCTCTCGGCTTGGAGTGTTCTTGAGTTGAGAACGCGGGtCTGTTTCTCCTCGGGGGAGAGCATGCCATCTACAACCACAACCTGGTACTGCCTATGTTTCAGGTTGCCAGAGAACTTCCTCATGCGGCGGACAGCTGTGCTAACAGTGGAGCCATCTTGGCTCAGCAGTTTCCTCACATCTCCAGGTGAACAGCCAGGGTCCAGGAGCAACAGGCACAGGCTGCCATTCTTCTTCTGTTCCACTCCTACTATAGAGCGGCTATGGCCTGAGGATGTCAATAGAAGACATGGAGGAAACAcactaaagccttgttcacactgcatgCCTTAGTGcccaaatcagttttgtttttcaaatgcaTTTTGGACTACTGACTTTCCACACAGCAtgttacaagtgaccaaatcggatttgtgtgtgttcagatagcattcatttgctgacatggctatgcTAGTTTTCATAGTAACAACGGGTGTGTGCACAGTGctgtaggctgattggtggtggtgctcaTGCTTCCCatcactcagaagttatgtaTCAAGCTAAGGTAATAACAATGCCTGCCATGGATGTTTCCCCAGTTGCTTTGCATGTTCAaaaatcatagtgtaagaacACTTAAAGCCTTAAAAGGATaagatgatccaactttcaaaTGGAATCATCTGgatagccacagcagtcaactagctagcagTTTAGCTTTCTAGCATATTCACTCATTTGTTTGCAAACAATTAACCGGCAAGTTActaccacatgttcttgtcaaactgtcaacgGAGTAGCTAGCAACCAACAAGATATGCCAAAAAAGTCTAAAAAAACAAACACTGGAGGGCAAATAAATCTGGTTTGACCATTCACACAAGTCACACGGCCGggaatcagatttgtatctgaCTTTAAAAACACCTATgaaggtggtttgaaatgtggcttgaaatatcagattccatgtgctttttggcaGTTCAGACTGCAGGAAACAGAACAGATTTGAATCGGATATGCAAATAAATaggatttgagtcacttcaaactgccaatgtgaacaCGGCTTTAGAGATAACGTAGACACcagatgtacagtcgtggccaatagttttgagaatgacacaaatattaatttccacaaagtttgctgcttcagtgtctttagatatttttgtcagatgttactatggaatactgaagtataattacaagcatttcataagtgtcaaaggcttttattgacaat

Function

NR:

description
LOW QUALITY PROTEIN: zinc finger with UFM1-specific peptidase domain protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU146777 True 1316 TUCP 0.42 2 26794210 26795762

Neighbor

gene id symbol gene type direction distance location
rwdd1 rwdd1 coding upstream 14731 26770464 ~ 26779479 (+)
LOC110485092 LOC106605522 coding upstream 28393 26746971 ~ 26765817 (+)
LOC110485091 LOC106605521 coding upstream 52430 26738924 ~ 26741780 (+)
trnar-acg-2 NA coding upstream 152971 26641167 ~ 26641239 (+)
LOC110539196 LOC106605517 coding upstream 180773 26596265 ~ 26613437 (+)
LOC110485096 LOC106605526 coding downstream 17722 26813484 ~ 26823336 (+)
LOC110485145 LOC106579269 coding downstream 102167 26897929 ~ 26903411 (+)
LOC110533712 NA coding downstream 109139 26904901 ~ 26909167 (+)
LOC110485187 LOC106605537 coding downstream 121633 26917395 ~ 26934478 (+)
LOC110485212 LOC106605536 coding downstream 352118 27147880 ~ 27175747 (+)
G127188 NA non-coding upstream 1919 26792028 ~ 26792291 (+)
G127165 LOC106605523 non-coding upstream 32682 26760442 ~ 26761528 (+)
G126748 NA non-coding upstream 132843 26660012 ~ 26661367 (+)
G126695 NA non-coding upstream 230868 26563047 ~ 26563342 (+)
G126694 NA non-coding upstream 232202 26561498 ~ 26562008 (+)
G127202 NA non-coding downstream 29550 26825312 ~ 26825904 (+)
G127209 NA non-coding downstream 32486 26828248 ~ 26828451 (+)
G127211 NA non-coding downstream 34433 26830195 ~ 26830696 (+)
G127216 NA non-coding downstream 38345 26834107 ~ 26855129 (+)
G127198 LOC106605538 non-coding downstream 61936 26857698 ~ 26861242 (+)
G126727 LOC106581475 other upstream 165561 26626849 ~ 26628649 (+)
G126387 LOC105417071 other upstream 744106 26049850 ~ 26050104 (+)
G125934 NA other upstream 1036357 25682880 ~ 25757853 (+)
LOC110534557 LOC106605501 other upstream 1411898 25377221 ~ 25396334 (+)
G124451 LOC106578403 other upstream 1920376 24873051 ~ 24873834 (+)
G127644 LOC106605534 other downstream 394229 27189991 ~ 27190593 (+)
LOC110485466 LOC106605529 other downstream 506316 27288172 ~ 27303644 (+)
G128185 NA other downstream 920720 27716482 ~ 27717163 (+)

Expression


Co-expression Network