G127307


Basic Information

Item Value
gene id G127307
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 26820766 ~ 26822599 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU146922
AAAACAAAACATGTTCTAGAAGCAGTTGTAAAGGTGAGGGGAACCAGGAAACAAACACATACCCAACAAAAGATCAGAATAAAGCAGCAACAGGTAAGTGTGCAAAGACTCAACAATAAGTACAACATTGCATATCTCAGTCAGAAAACACATTATACTGCAATTAATAAATCACCCCTTCCAATTAGTAGGTATTTTCTCCCCCATATAATTTCTtacatgtatatataatatacaaaGCACTCAAGTTCAACTGAGCATTTTATATCAACGTCCAATAGCGTTAAGTCCAATGTAAGGTTAACCACCACCAATAAAACAAAAAGACTTCAGCAAAACAAATAAGTCATGACATCATAATAACTCATGGTGAGATGACGGGAAAAAACACAACTACAAAAGAACTCTGAGAGCCTGTGTTTTTATTCACCTGGAGattgttacagacagacactgcaTCACACAACAGATACTAGTCACTGAACCTAACCCGTCTGGCACTGTACTGTGGCTGGCTGGCGGCGCTTCAATAAGGAGCACTCACACAAGCAGAACACTCCTCAACGTTACCCTAACGTTGTGTCAATCCTACCGTAACGTTGTTACAGATAAGCATAAGCCTGGCTGAACGCTATGCTGACTAATGCAGCAAGTGACATGCAGTGTTTCCCTACACAATGCATCTACATTACTGCGGTCAGTTCGATGCAACTGGTGTTCTGTTATTCTAAAGTTAATATTGCCAGGGTCAAGGAACTGAAAGACATTTCAACAGAATAAATAAGATTAGGAATCTCCAGGTCAACCATTGTCAATTTTATCATTGAAGAGAGACCCCAGAGAAAGATGTCCAGTGAGAGAGGCGAGATGGGGTAGTGTCATCAGTTCAGGTCTAAACAGCCCTATGGAGACTGGACTCCCCTGGGGGGGTGGTAGATACTCAAAGGGGTGaaggtcaaaggtcagggtgTGGTTAGAGCTGGAAGATAAACTGGCCTTGGTTCTGGTCCACCTGCGGGGCGATGCTAgcgtcctcctcctccacaccaaAGTAGTGCTCGATCAGGTCAAAAGCCTTCTGGTAGATCTCCTGATTCTCATGGCTCTGCAAGAACTCGATCTTGT

Function

NR:

description
PREDICTED: importin subunit alpha-6-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU146922 True 1125 lncRNA 0.43 3 26820766 26822599

Neighbor

gene id symbol gene type direction distance location
LOC110534567 cf113 coding downstream 6107 26794149 ~ 26814659 (-)
LOC110485095 LOC106579313 coding downstream 33782 26781796 ~ 26786984 (-)
LOC110485094 LOC106605523 coding downstream 58132 26760385 ~ 26762634 (-)
lars2 lars2 coding downstream 94606 26683358 ~ 26726160 (-)
LOC110539285 LOC106579350 coding downstream 145117 26641958 ~ 26675649 (-)
LOC110485107 LOC106605539 coding upstream 12065 26834664 ~ 26839122 (-)
LOC110485118 cndp1 coding upstream 27144 26849743 ~ 26858369 (-)
LOC110485134 LOC106605538 coding upstream 35812 26858411 ~ 26863425 (-)
LOC110485162 LOC106605541 coding upstream 88799 26911398 ~ 26917150 (-)
LOC110485234 LOC106605534 coding upstream 361911 27184510 ~ 27202253 (-)
G127268 NA non-coding downstream 82987 26736841 ~ 26737779 (-)
G127131 NA non-coding downstream 136128 26684168 ~ 26684638 (-)
G127074 NA non-coding downstream 192163 26626693 ~ 26628603 (-)
G127080 NA non-coding downstream 194147 26626166 ~ 26626619 (-)
G127313 NA non-coding upstream 10573 26833172 ~ 26854454 (-)
G127342 NA non-coding upstream 55851 26878450 ~ 26914822 (-)
G127323 NA non-coding upstream 79424 26902023 ~ 26903399 (-)
G127372 NA non-coding upstream 112873 26935472 ~ 26935844 (-)
G127382 NA non-coding upstream 120164 26942763 ~ 26943032 (-)
G127083 NA other downstream 258639 26561614 ~ 26562127 (-)
G125305 NA other downstream 2044139 24775220 ~ 24776627 (-)
LOC110538887 LOC106605647 other downstream 2286237 24531424 ~ 24540898 (-)
G125043 NA other downstream 2495930 24324580 ~ 24324836 (-)
LOC110485245 ubr5 other upstream 448661 27231538 ~ 27278158 (-)
G129250 NA other upstream 943558 27766157 ~ 27766532 (-)
LOC110485663 LOC106579570 other upstream 1274083 27933389 ~ 28149986 (-)
G129582 NA other upstream 1487720 28310319 ~ 28310732 (-)
LOC110534614 LOC106605399 other upstream 1654587 28475823 ~ 28533709 (-)

Expression


Co-expression Network