G127216


Basic Information

Item Value
gene id G127216
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 26834107 ~ 26855129 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU146810
gtcttctccttgtatgagctgaaagtttagagggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgtttcttgttcttcatgatgctctctgcgcttttaacagacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU146810 True 392 lncRNA 0.43 2 26834107 26855129

Neighbor

gene id symbol gene type direction distance location
LOC110485096 LOC106605526 coding upstream 10771 26813484 ~ 26823336 (+)
rwdd1 rwdd1 coding upstream 54628 26770464 ~ 26779479 (+)
LOC110485092 LOC106605522 coding upstream 68290 26746971 ~ 26765817 (+)
LOC110485091 LOC106605521 coding upstream 92327 26738924 ~ 26741780 (+)
trnar-acg-2 NA coding upstream 192868 26641167 ~ 26641239 (+)
LOC110485145 LOC106579269 coding downstream 42800 26897929 ~ 26903411 (+)
LOC110533712 NA coding downstream 49772 26904901 ~ 26909167 (+)
LOC110485187 LOC106605537 coding downstream 62266 26917395 ~ 26934478 (+)
LOC110485212 LOC106605536 coding downstream 292751 27147880 ~ 27175747 (+)
LOC110485224 rn146 coding downstream 323858 27178987 ~ 27182559 (+)
G127211 NA non-coding upstream 3411 26830195 ~ 26830696 (+)
G127209 NA non-coding upstream 5656 26828248 ~ 26828451 (+)
G127202 NA non-coding upstream 8203 26825312 ~ 26825904 (+)
G127188 NA non-coding upstream 41816 26792028 ~ 26792291 (+)
G127165 LOC106605523 non-coding upstream 72579 26760442 ~ 26761528 (+)
G127198 LOC106605538 non-coding downstream 2569 26857698 ~ 26861242 (+)
G127200 NA non-coding downstream 6163 26861292 ~ 26863437 (+)
G127256 NA non-coding downstream 81289 26936418 ~ 26936967 (+)
G127376 NA non-coding downstream 84543 26939672 ~ 26939929 (+)
G127381 NA non-coding downstream 87027 26942156 ~ 26942373 (+)
G127190 cf113 other upstream 38345 26794210 ~ 26795762 (+)
G126727 LOC106581475 other upstream 205458 26626849 ~ 26628649 (+)
G126387 LOC105417071 other upstream 784003 26049850 ~ 26050104 (+)
G125934 NA other upstream 1076254 25682880 ~ 25757853 (+)
LOC110534557 LOC106605501 other upstream 1451795 25377221 ~ 25396334 (+)
G127644 LOC106605534 other downstream 334862 27189991 ~ 27190593 (+)
LOC110485466 LOC106605529 other downstream 446949 27288172 ~ 27303644 (+)
G128185 NA other downstream 861353 27716482 ~ 27717163 (+)

Expression


Co-expression Network