G127482


Basic Information

Item Value
gene id G127482
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 27036342 ~ 27042176 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU147106
ggtagagacagatacagagacagatacagagacagatacagatacagagacagatccagagacagatccagagacagatccagagacagagacagatacaggtacagagacagagacagagacagatccagatccagatccagatccagagacagagacagatacacatacagagacagagacagatacagatccagagacagatacagagacagatacagatacaggtccagagacagacacagagacagatccagagacagatacaggtacagagacagagacagatacagagacagatacagagacagatccagatacaggtccagagacagatacagagacagatccagagacagatacaggtacagagacagagacagatacagagacagaaacagagacagatacagagacagatacagatccagagacagatccagagacagatccagagacagatccagagacagatataggtacatagacagagacagagacagatccagatacagagacagatacagagacagagacagatacagagacagatacagatacagatacagatacagagacagatacagatacagatacagagacaggtacagagacagatacaggtacagagacagagacagagacagagacagatacagagacatatacagagacagagacagagacagagacagatacagagacagatacagatacagagacagatacagatacagatacagagacagagacagatacagagacagatacagagacagatccagagacagatacaggtacatagacagagacagagacagatacagagacagagacagagacagatacagatacagatacagatacagatacagatacagagacaggtacagagacagatacaggtacatagacagagacagatacagagacagatccagatacaGCGACAGATCCAGATAcagcgacagagacagatacagatacagagacagatccagagacagatccagagacagatccagagacagatacaggtacatagacagagacagagacagagacagatacagatacagatacagagacagatccagagacagatacaggtacatagacagagacagagacagatacagatacagatacagatacatatacagagacagagacagagacagatacagagacagatacagagacagatac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU147106 True 1209 lncRNA 0.44 3 27036342 27042176

Neighbor

gene id symbol gene type direction distance location
LOC110485187 LOC106605537 coding upstream 101864 26917395 ~ 26934478 (+)
LOC110533712 NA coding upstream 127175 26904901 ~ 26909167 (+)
LOC110485145 LOC106579269 coding upstream 132931 26897929 ~ 26903411 (+)
LOC110485096 LOC106605526 coding upstream 213006 26813484 ~ 26823336 (+)
rwdd1 rwdd1 coding upstream 256863 26770464 ~ 26779479 (+)
LOC110485212 LOC106605536 coding downstream 105704 27147880 ~ 27175747 (+)
LOC110485224 rn146 coding downstream 136811 27178987 ~ 27182559 (+)
LOC110485466 LOC106605529 coding downstream 245996 27288172 ~ 27303644 (+)
LOC110485500 LOC106579140 coding downstream 279374 27321550 ~ 27331169 (+)
LOC110485507 LOC106579115 coding downstream 289521 27331697 ~ 27380409 (+)
G127433 NA non-coding upstream 50081 26985957 ~ 26986261 (+)
G127397 NA non-coding upstream 50408 26952442 ~ 26985934 (+)
G127396 NA non-coding upstream 84060 26951938 ~ 26952282 (+)
G127390 NA non-coding upstream 87896 26948228 ~ 26948446 (+)
G127381 NA non-coding upstream 93969 26942156 ~ 26942373 (+)
G127500 NA non-coding downstream 1274 27043450 ~ 27043680 (+)
G127503 NA non-coding downstream 2320 27044496 ~ 27044734 (+)
G127513 NA non-coding downstream 8161 27050337 ~ 27050669 (+)
G127517 NA non-coding downstream 12456 27054632 ~ 27054851 (+)
G127571 NA non-coding downstream 70032 27112208 ~ 27112513 (+)
G127198 LOC106605538 other upstream 175100 26857698 ~ 26861242 (+)
G127190 cf113 other upstream 240580 26794210 ~ 26795762 (+)
G126727 LOC106581475 other upstream 407693 26626849 ~ 26628649 (+)
G126387 LOC105417071 other upstream 986238 26049850 ~ 26050104 (+)
G125934 NA other upstream 1278489 25682880 ~ 25757853 (+)
G127644 LOC106605534 other downstream 147815 27189991 ~ 27190593 (+)
G128185 NA other downstream 674306 27716482 ~ 27717163 (+)
G128436 NA other downstream 1046471 28088647 ~ 28089445 (+)

Expression


Co-expression Network