G127513


Basic Information

Item Value
gene id G127513
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 27050337 ~ 27050669 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU147140
attcataccccttggtgtttttcctatttttttgcattacaacctgtaatttaaatgtatttttatttggatgtcATGTAATGGacgtacacaaaatagtccaaattggtgaagtgaaatgaaaaatattactgaaaagtggtgcgtgcatatgtattcaccccctttgctgaagcccctaaataagatctggtgcaaccaattaccttcagaagtcacataattcgtTTTaaaaaagtccacctgtgtggaatctaagtgtcacatgatctgtcacatgatcttagtatatgtacacctgttctgaaaggtcaCTATGCAAGGGACACCagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU147140 True 333 lncRNA 0.37 1 27050337 27050669

Neighbor

gene id symbol gene type direction distance location
LOC110485187 LOC106605537 coding upstream 115859 26917395 ~ 26934478 (+)
LOC110533712 NA coding upstream 141170 26904901 ~ 26909167 (+)
LOC110485145 LOC106579269 coding upstream 146926 26897929 ~ 26903411 (+)
LOC110485096 LOC106605526 coding upstream 227001 26813484 ~ 26823336 (+)
rwdd1 rwdd1 coding upstream 270858 26770464 ~ 26779479 (+)
LOC110485212 LOC106605536 coding downstream 97211 27147880 ~ 27175747 (+)
LOC110485224 rn146 coding downstream 128318 27178987 ~ 27182559 (+)
LOC110485466 LOC106605529 coding downstream 237503 27288172 ~ 27303644 (+)
LOC110485500 LOC106579140 coding downstream 270881 27321550 ~ 27331169 (+)
LOC110485507 LOC106579115 coding downstream 281028 27331697 ~ 27380409 (+)
G127503 NA non-coding upstream 5603 27044496 ~ 27044734 (+)
G127500 NA non-coding upstream 6657 27043450 ~ 27043680 (+)
G127482 NA non-coding upstream 8161 27036342 ~ 27042176 (+)
G127433 NA non-coding upstream 64076 26985957 ~ 26986261 (+)
G127397 NA non-coding upstream 64403 26952442 ~ 26985934 (+)
G127517 NA non-coding downstream 3963 27054632 ~ 27054851 (+)
G127571 NA non-coding downstream 61539 27112208 ~ 27112513 (+)
G127608 NA non-coding downstream 90544 27141213 ~ 27141510 (+)
G127702 ubr5 non-coding downstream 219464 27270133 ~ 27270723 (+)
G127709 NA non-coding downstream 229849 27280518 ~ 27280720 (+)
G127198 LOC106605538 other upstream 189095 26857698 ~ 26861242 (+)
G127190 cf113 other upstream 254575 26794210 ~ 26795762 (+)
G126727 LOC106581475 other upstream 421688 26626849 ~ 26628649 (+)
G126387 LOC105417071 other upstream 1000233 26049850 ~ 26050104 (+)
G125934 NA other upstream 1292484 25682880 ~ 25757853 (+)
G127644 LOC106605534 other downstream 139322 27189991 ~ 27190593 (+)
G128185 NA other downstream 665813 27716482 ~ 27717163 (+)
G128436 NA other downstream 1037978 28088647 ~ 28089445 (+)

Expression


Co-expression Network