G127945


Basic Information

Item Value
gene id G127945
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 27290244 ~ 27293324 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU147608
gatccaaaacataaagcaacatttacaatggaatggttcaaaaataaacatatccaggtgttagaatggccaagtcaaagtccagacctgaatccaatcgagaatctgtggaaagaactgaaaactgctgttcacaaatgctctccatccaacctcactgagctcgagctgttttgcaaggaggaatgggaaacaatttcagtctctcaatgtgcaaaactgatagagacataccccaagcgacttacagctgtaatcgcagcaaaaggtggcgctacaaagtattaacttaagggggctgaataattttgcacgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaaatacagttgtatatctttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaaggggggcgaatactttcgcaaggcactgtat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU147608 True 511 lncRNA 0.39 2 27290244 27293324

Neighbor

gene id symbol gene type direction distance location
LOC110485245 ubr5 coding downstream 12086 27231538 ~ 27278158 (-)
LOC110485403 NA coding downstream 59116 27215972 ~ 27231128 (-)
LOC110485460 LOC106605533 coding downstream 74842 27203190 ~ 27215402 (-)
LOC110485234 LOC106605534 coding downstream 87991 27184510 ~ 27202253 (-)
LOC110485162 LOC106605541 coding downstream 373094 26911398 ~ 26917150 (-)
LOC110485483 LOC106605528 coding upstream 15190 27308514 ~ 27317719 (-)
LOC110533720 LOC106605543 coding upstream 88017 27381341 ~ 27385479 (-)
LOC110485571 oxr1 coding upstream 126322 27419646 ~ 27633110 (-)
LOC110485644 LOC106579058 coding upstream 384984 27678308 ~ 27825113 (-)
LOC110534585 LOC106605382 coding upstream 634340 27927664 ~ 27931710 (-)
G127607 NA non-coding downstream 149524 27140502 ~ 27140720 (-)
G127596 NA non-coding downstream 159351 27130539 ~ 27130893 (-)
G127579 NA non-coding downstream 171571 27118446 ~ 27118673 (-)
G127504 NA non-coding downstream 245552 27044416 ~ 27044692 (-)
G127905 LOC106579140 non-coding upstream 28150 27321474 ~ 27331163 (-)
G127991 NA non-coding upstream 74567 27367891 ~ 27369610 (-)
G128001 NA non-coding upstream 96264 27389588 ~ 27389825 (-)
G128003 NA non-coding upstream 97545 27390869 ~ 27392647 (-)
G128027 NA non-coding upstream 178674 27471998 ~ 27472270 (-)
LOC110539285 LOC106579350 other downstream 627230 26641958 ~ 26675649 (-)
G127083 NA other downstream 728117 26561614 ~ 26562127 (-)
G125305 NA other downstream 2513617 24775220 ~ 24776627 (-)
LOC110538887 LOC106605647 other downstream 2755715 24531424 ~ 24540898 (-)
G129250 NA other upstream 472833 27766157 ~ 27766532 (-)
LOC110485663 LOC106579570 other upstream 803358 27933389 ~ 28149986 (-)
G129582 NA other upstream 1016995 28310319 ~ 28310732 (-)
LOC110534614 LOC106605399 other upstream 1183862 28475823 ~ 28533709 (-)
LOC110486376 LOC106605451 other upstream 2575722 29859575 ~ 29878744 (-)

Expression


Co-expression Network