G127699 (LOC106605528)


Basic Information

Item Value
gene id G127699
gene name LOC106605528
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 27310567 ~ 27312496 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU147333
CAGAGCCGGAGCTGGAATCACATtgtctgctagcttgctagtgAACGAGCCGTACACCCCATCGTTCATGTAGTACAGGAACTCTGGCTCATCGTTGGGAGATGGTTCATTGAGATTGCCATGAAGATCCCGGGCGCCTACTTCCTTAGCGATGATGTTGACAGCCAGGGTGAAGGAGGAGGACACGTAGTAACTGCCAGGCTCTGCCATGATGGAGACGCCAGACGATGCAGGGAAGTACAGGTCCAACAACGGCCTGACTGCACTGTTAATCTGTTTCAGACACTGCATGGCTGTAGGCCTGAGGGTCGTCACAGGAGCTGGGAATGTGGAACCTGCATCATGGGGATAATGATGATGTCAGGGATCAGGGATTGACTGAGGAACGGAAACTGAGCAGTCGGGCAAGTTGAGCGTGCTCAGAGGTCACccaaagtgagaaaaaaaagtgAAACAACAAAACTGCTAAAAACTCCAGTAAACCTAAAACTGATTGTCTGGTTCATCTCCATTGTTTAAGTGAAAGACTGAAAATATATGGCAGCTTCATTAGAcaggtgataaaaaaaaaaaactgaattcCAGTAGCCAAGCATGGGGGCTACACTGGAGATTCTGACCTGATTAACTGGAAGTTTAACGTGTGGTCAGAGCGCTAGCCACTATGTCCTATTGATCTCGGCTGTGAGCTGCACGTTGAAATCTTGAAAATAGAACCAGAACGTAGATCAGCGCAAACCTCTTGGGGAGCCGGCACGCTTACACCCAGGGTTTTGTTGAAATTAATAAGAGTGTCTCACACTCTGCGAAAGTTATACGTCCAATGTAATAGACCCGTAAAACAGACCTCTCTACTTCCTCCCTATTGTTACGTGACCGACAAGTTACGGCAATTTGGGTGTAAACAAATATTTTCACATTTTCGGGCAAGTGACCATATTCTTCAGGCAAACAAAAAATACTACTGAATTGTCCAATGGTCAATCCCCAATGATACAGTAAAATATTTTCTCCTCATGGTGAAAATAGTACTGGACAGGCATACAATTCTGCTGTTAGCATACAGTTTAATTTCTTATCACTTAATTAAAAGACAATAAAAAGAGAACCTAGAATATAATAATGAACTCTGACTAGAGAGGAAGGGTGGCGTTGCAGAAGGACTCACCTGACCCCCACCACCTGCAGGCCCTGCTCTTTGGCACTCTCCAGCAGGTGTCTGCAGTCCTTCAGCTTGGAGCCAAACGACATGCCCATTTCATCACCCTCGCTGGAAGTCTCTGTGGCCACCTGCAGCAGCAGTCTG

Function

NR:

description
antizyme inhibitor 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU147333 True 1306 lncRNA 0.46 3 27310567 27312496

Neighbor

gene id symbol gene type direction distance location
LOC110485466 LOC106605529 coding upstream 6923 27288172 ~ 27303644 (+)
LOC110485224 rn146 coding upstream 128008 27178987 ~ 27182559 (+)
LOC110485212 LOC106605536 coding upstream 134820 27147880 ~ 27175747 (+)
LOC110485187 LOC106605537 coding upstream 376089 26917395 ~ 26934478 (+)
LOC110533712 NA coding upstream 401400 26904901 ~ 26909167 (+)
LOC110485500 LOC106579140 coding downstream 9054 27321550 ~ 27331169 (+)
LOC110485507 LOC106579115 coding downstream 19201 27331697 ~ 27380409 (+)
LOC110485543 LOC106579099 coding downstream 78094 27390590 ~ 27403425 (+)
LOC110485528 LOC106605545 coding downstream 91169 27403665 ~ 27408989 (+)
LOC110485563 LOC106579093 coding downstream 97269 27409765 ~ 27419165 (+)
G127697 LOC106605528 non-coding upstream 527 27308528 ~ 27310040 (+)
G127712 NA non-coding upstream 26879 27283390 ~ 27283688 (+)
G127709 NA non-coding upstream 29847 27280518 ~ 27280720 (+)
G127702 ubr5 non-coding upstream 39844 27270133 ~ 27270723 (+)
G127608 NA non-coding upstream 169057 27141213 ~ 27141510 (+)
G127767 NA non-coding downstream 76046 27388542 ~ 27388818 (+)
G127775 NA non-coding downstream 111555 27424051 ~ 27429021 (+)
G127824 NA non-coding downstream 207491 27519987 ~ 27569509 (+)
G128160 NA non-coding downstream 353528 27666024 ~ 27666362 (+)
G128163 LOC106605482 non-coding downstream 369938 27682434 ~ 27682656 (+)
G127644 LOC106605534 other upstream 119974 27189991 ~ 27190593 (+)
G127198 LOC106605538 other upstream 449325 26857698 ~ 26861242 (+)
G127190 cf113 other upstream 514805 26794210 ~ 26795762 (+)
G128185 NA other downstream 403986 27716482 ~ 27717163 (+)
G128436 NA other downstream 776151 28088647 ~ 28089445 (+)
G128490 NA other downstream 938346 28250842 ~ 28547915 (+)
LOC110485990 LOC106579931 other downstream 1619560 28931988 ~ 28951235 (+)
G128853 LOC106605419 other downstream 1627403 28939899 ~ 28981288 (+)

Expression


Co-expression Network