G127767


Basic Information

Item Value
gene id G127767
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 27388542 ~ 27388818 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU147404
CCCTGGGGGGAGCCCAGATAACCGGATGTTTGTGTCTGATGTTGTCTGCTCCACAGTCCTGGAGTGGAACCATTCCTCCAGGCATGCCTGTCACCCGGGCCCTCGTCGAACCCTGGCCTTCGTGTGACAACGCTTTTGGCGGCCTACTATGGTTCTGGGTGTTGCCACATTTGTTGCCGCCTGCATGGTCTGCACACAGAACAAAACTCCTTGGCAAGCTCCAGCTGGTCTTCCCAAACCACTGCCTGTCCTTCACCGTCCCTGGTCCCATATATCC

Function

NR:

description
Pol polyprotein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU147404 True 277 lncRNA 0.57 1 27388542 27388818

Neighbor

gene id symbol gene type direction distance location
LOC110485507 LOC106579115 coding upstream 8133 27331697 ~ 27380409 (+)
LOC110485500 LOC106579140 coding upstream 57373 27321550 ~ 27331169 (+)
LOC110485466 LOC106605529 coding upstream 84898 27288172 ~ 27303644 (+)
LOC110485224 rn146 coding upstream 205983 27178987 ~ 27182559 (+)
LOC110485212 LOC106605536 coding upstream 212795 27147880 ~ 27175747 (+)
LOC110485543 LOC106579099 coding downstream 1772 27390590 ~ 27403425 (+)
LOC110485528 LOC106605545 coding downstream 14847 27403665 ~ 27408989 (+)
LOC110485563 LOC106579093 coding downstream 20947 27409765 ~ 27419165 (+)
LOC110485628 LOC106605483 coding downstream 262793 27651611 ~ 27678014 (+)
LOC110534576 dpys coding downstream 518971 27907789 ~ 27909986 (+)
G127699 LOC106605528 non-coding upstream 76046 27310567 ~ 27312496 (+)
G127697 LOC106605528 non-coding upstream 78502 27308528 ~ 27310040 (+)
G127712 NA non-coding upstream 104854 27283390 ~ 27283688 (+)
G127709 NA non-coding upstream 107822 27280518 ~ 27280720 (+)
G127702 ubr5 non-coding upstream 117819 27270133 ~ 27270723 (+)
G127775 NA non-coding downstream 35233 27424051 ~ 27429021 (+)
G127824 NA non-coding downstream 131169 27519987 ~ 27569509 (+)
G128160 NA non-coding downstream 277206 27666024 ~ 27666362 (+)
G128163 LOC106605482 non-coding downstream 293616 27682434 ~ 27682656 (+)
G128165 NA non-coding downstream 296770 27685588 ~ 27685805 (+)
G127644 LOC106605534 other upstream 197949 27189991 ~ 27190593 (+)
G127198 LOC106605538 other upstream 527300 26857698 ~ 26861242 (+)
G127190 cf113 other upstream 592780 26794210 ~ 26795762 (+)
G128185 NA other downstream 327664 27716482 ~ 27717163 (+)
G128436 NA other downstream 699829 28088647 ~ 28089445 (+)
G128490 NA other downstream 862024 28250842 ~ 28547915 (+)
LOC110485990 LOC106579931 other downstream 1543238 28931988 ~ 28951235 (+)
G128853 LOC106605419 other downstream 1551081 28939899 ~ 28981288 (+)

Expression


Co-expression Network