G127775


Basic Information

Item Value
gene id G127775
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 27424051 ~ 27429021 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU147414
AAACAGATAGCTCCTCAGGGAGGGCCAGCACTGCTCTGGCTGAAGGCCTGTGGTTGAACCATGACGTTGCTTTAGGAAATAGACCATTGACAATCAATGGGCATGGATCAAGCCATTGTGCCCGTTAGCAGTGGGAGGTATTACCTTCTCTATTTGCTGTGCCTCCAGCAGCTCGCTAGGCTCACTGAGGTTGGGTCTGAAGGTCTCAGGCTCCAGCTCCGTCTTGATAGAGGTGGCATGCTTAGAGTTCACCTCCTCCTTGGTGGTGATATAAGTGTACTTAGGGGTCAGCGGCGTTTCTTCCTTCACCCTTCTAGAGAACATTTCTTTCTTTCGGGGCGAGGTTGAGCTCGACAGTCACATTCCTGAAGTAATTCCAATCTCCACAAGTCGATGTTGAACCAGACACCGGACGGGCGGGGAATCTA

Function

NR:

description
Oxidation resistance protein 1, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU147414 True 428 lncRNA 0.51 2 27424051 27429021

Neighbor

gene id symbol gene type direction distance location
LOC110485563 LOC106579093 coding upstream 4886 27409765 ~ 27419165 (+)
LOC110485528 LOC106605545 coding upstream 15062 27403665 ~ 27408989 (+)
LOC110485543 LOC106579099 coding upstream 20626 27390590 ~ 27403425 (+)
LOC110485507 LOC106579115 coding upstream 43642 27331697 ~ 27380409 (+)
LOC110485500 LOC106579140 coding upstream 92882 27321550 ~ 27331169 (+)
LOC110485628 LOC106605483 coding downstream 222590 27651611 ~ 27678014 (+)
LOC110534576 dpys coding downstream 478768 27907789 ~ 27909986 (+)
LOC110485682 LOC106605395 coding downstream 736139 28165160 ~ 28171323 (+)
LOC110485672 LOC106605394 coding downstream 742825 28171846 ~ 28180205 (+)
ddr1 LOC106605397 coding downstream 765541 28194562 ~ 28250766 (+)
G127767 NA non-coding upstream 35233 27388542 ~ 27388818 (+)
G127699 LOC106605528 non-coding upstream 111555 27310567 ~ 27312496 (+)
G127697 LOC106605528 non-coding upstream 114011 27308528 ~ 27310040 (+)
G127712 NA non-coding upstream 140363 27283390 ~ 27283688 (+)
G127709 NA non-coding upstream 143331 27280518 ~ 27280720 (+)
G127824 NA non-coding downstream 90966 27519987 ~ 27569509 (+)
G128160 NA non-coding downstream 237003 27666024 ~ 27666362 (+)
G128163 LOC106605482 non-coding downstream 253413 27682434 ~ 27682656 (+)
G128165 NA non-coding downstream 256567 27685588 ~ 27685805 (+)
G128175 NA non-coding downstream 271221 27700242 ~ 27700863 (+)
LOC110485466 LOC106605529 other upstream 120496 27288172 ~ 27303644 (+)
G127644 LOC106605534 other upstream 233458 27189991 ~ 27190593 (+)
LOC110485212 LOC106605536 other upstream 263406 27147880 ~ 27175747 (+)
G127198 LOC106605538 other upstream 562809 26857698 ~ 26861242 (+)
G127190 cf113 other upstream 628289 26794210 ~ 26795762 (+)
G128185 NA other downstream 287461 27716482 ~ 27717163 (+)
G128436 NA other downstream 659626 28088647 ~ 28089445 (+)
G128490 NA other downstream 821821 28250842 ~ 28547915 (+)
LOC110485990 LOC106579931 other downstream 1503035 28931988 ~ 28951235 (+)
G128853 LOC106605419 other downstream 1510878 28939899 ~ 28981288 (+)

Expression


Co-expression Network