Gene
RNA
| Item | Value |
|---|---|
| gene id | G128027 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 27471998 ~ 27472270 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: inactive phospholipase C-like protein 1 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU147708 | True | 253 | lncRNA | 0.53 | 2 | 27471998 | 27472270 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533720 | LOC106605543 | coding | downstream | 86519 | 27381341 ~ 27385479 (-) |
| LOC110485483 | LOC106605528 | coding | downstream | 154279 | 27308514 ~ 27317719 (-) |
| LOC110485245 | ubr5 | coding | downstream | 193840 | 27231538 ~ 27278158 (-) |
| LOC110485403 | NA | coding | downstream | 240870 | 27215972 ~ 27231128 (-) |
| LOC110485460 | LOC106605533 | coding | downstream | 256596 | 27203190 ~ 27215402 (-) |
| LOC110485644 | LOC106579058 | coding | upstream | 206038 | 27678308 ~ 27825113 (-) |
| LOC110534585 | LOC106605382 | coding | upstream | 455394 | 27927664 ~ 27931710 (-) |
| LOC110485663 | LOC106579570 | coding | upstream | 461119 | 27933389 ~ 28149986 (-) |
| LOC110485705 | LOC106605396 | coding | upstream | 680219 | 28152489 ~ 28164855 (-) |
| LOC110485712 | LOC106605398 | coding | upstream | 780355 | 28252625 ~ 28265466 (-) |
| G128003 | NA | non-coding | downstream | 79351 | 27390869 ~ 27392647 (-) |
| G128001 | NA | non-coding | downstream | 82173 | 27389588 ~ 27389825 (-) |
| G127991 | NA | non-coding | downstream | 102388 | 27367891 ~ 27369610 (-) |
| G127905 | LOC106579140 | non-coding | downstream | 140835 | 27321474 ~ 27331163 (-) |
| G127945 | NA | non-coding | downstream | 178674 | 27290244 ~ 27293324 (-) |
| G128046 | NA | non-coding | upstream | 29187 | 27501457 ~ 27501791 (-) |
| G128086 | NA | non-coding | upstream | 105254 | 27577524 ~ 27584211 (-) |
| G128151 | NA | non-coding | upstream | 178720 | 27650990 ~ 27651280 (-) |
| G129194 | NA | non-coding | upstream | 212101 | 27684371 ~ 27684582 (-) |
| G129204 | NA | non-coding | upstream | 226063 | 27698333 ~ 27698996 (-) |
| LOC110539285 | LOC106579350 | other | downstream | 808984 | 26641958 ~ 26675649 (-) |
| G127083 | NA | other | downstream | 909871 | 26561614 ~ 26562127 (-) |
| G125305 | NA | other | downstream | 2695371 | 24775220 ~ 24776627 (-) |
| LOC110538887 | LOC106605647 | other | downstream | 2937469 | 24531424 ~ 24540898 (-) |
| G129250 | NA | other | upstream | 293887 | 27766157 ~ 27766532 (-) |
| G129582 | NA | other | upstream | 838049 | 28310319 ~ 28310732 (-) |
| LOC110534614 | LOC106605399 | other | upstream | 1004916 | 28475823 ~ 28533709 (-) |
| LOC110486376 | LOC106605451 | other | upstream | 2396776 | 29859575 ~ 29878744 (-) |
