G127824


Basic Information

Item Value
gene id G127824
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 27519987 ~ 27569509 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU147468
acattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgcacgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccccttcatgattgtgtcccacttgttgttgattcttcacaaaaaaatacagttttatatctttattgtttgaagcctgaaatgtggcaaaaggtcgcaaagtttaaggggtccgaatactttcgcaaggcactgtatatccagtGTCTGTGGAGCAAGCAGAAATGAAACCAACCATAACCTTGAT

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU147468 True 329 lncRNA 0.38 2 27519987 27569509

Neighbor

gene id symbol gene type direction distance location
LOC110485563 LOC106579093 coding upstream 100822 27409765 ~ 27419165 (+)
LOC110485528 LOC106605545 coding upstream 110998 27403665 ~ 27408989 (+)
LOC110485543 LOC106579099 coding upstream 116562 27390590 ~ 27403425 (+)
LOC110485507 LOC106579115 coding upstream 139578 27331697 ~ 27380409 (+)
LOC110485500 LOC106579140 coding upstream 188818 27321550 ~ 27331169 (+)
LOC110485628 LOC106605483 coding downstream 82102 27651611 ~ 27678014 (+)
LOC110534576 dpys coding downstream 338280 27907789 ~ 27909986 (+)
LOC110485682 LOC106605395 coding downstream 595651 28165160 ~ 28171323 (+)
LOC110485672 LOC106605394 coding downstream 602337 28171846 ~ 28180205 (+)
ddr1 LOC106605397 coding downstream 625053 28194562 ~ 28250766 (+)
G127775 NA non-coding upstream 90966 27424051 ~ 27429021 (+)
G127767 NA non-coding upstream 131169 27388542 ~ 27388818 (+)
G127699 LOC106605528 non-coding upstream 207491 27310567 ~ 27312496 (+)
G127697 LOC106605528 non-coding upstream 209947 27308528 ~ 27310040 (+)
G127712 NA non-coding upstream 236299 27283390 ~ 27283688 (+)
G128160 NA non-coding downstream 96515 27666024 ~ 27666362 (+)
G128163 LOC106605482 non-coding downstream 112925 27682434 ~ 27682656 (+)
G128165 NA non-coding downstream 116079 27685588 ~ 27685805 (+)
G128175 NA non-coding downstream 130733 27700242 ~ 27700863 (+)
G128178 NA non-coding downstream 137644 27707153 ~ 27707361 (+)
LOC110485466 LOC106605529 other upstream 216432 27288172 ~ 27303644 (+)
G127644 LOC106605534 other upstream 329394 27189991 ~ 27190593 (+)
LOC110485212 LOC106605536 other upstream 359342 27147880 ~ 27175747 (+)
G127198 LOC106605538 other upstream 658745 26857698 ~ 26861242 (+)
G127190 cf113 other upstream 724225 26794210 ~ 26795762 (+)
G128185 NA other downstream 146973 27716482 ~ 27717163 (+)
G128436 NA other downstream 519138 28088647 ~ 28089445 (+)
G128490 NA other downstream 681333 28250842 ~ 28547915 (+)
LOC110485990 LOC106579931 other downstream 1362547 28931988 ~ 28951235 (+)
G128853 LOC106605419 other downstream 1370390 28939899 ~ 28981288 (+)

Expression


Co-expression Network