Gene
RNA
| Item | Value |
|---|---|
| gene id | G128160 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 27666024 ~ 27666362 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: WAS/WASL-interacting protein family member 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU147842 | True | 273 | lncRNA | 0.42 | 2 | 27666024 | 27666362 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110485563 | LOC106579093 | coding | upstream | 246859 | 27409765 ~ 27419165 (+) |
| LOC110485528 | LOC106605545 | coding | upstream | 257035 | 27403665 ~ 27408989 (+) |
| LOC110485543 | LOC106579099 | coding | upstream | 262599 | 27390590 ~ 27403425 (+) |
| LOC110485507 | LOC106579115 | coding | upstream | 285615 | 27331697 ~ 27380409 (+) |
| LOC110485500 | LOC106579140 | coding | upstream | 334855 | 27321550 ~ 27331169 (+) |
| LOC110534576 | dpys | coding | downstream | 241427 | 27907789 ~ 27909986 (+) |
| LOC110485682 | LOC106605395 | coding | downstream | 498798 | 28165160 ~ 28171323 (+) |
| LOC110485672 | LOC106605394 | coding | downstream | 505484 | 28171846 ~ 28180205 (+) |
| ddr1 | LOC106605397 | coding | downstream | 528200 | 28194562 ~ 28250766 (+) |
| LOC110485735 | LOC106605407 | coding | downstream | 603889 | 28270251 ~ 28280280 (+) |
| G127824 | NA | non-coding | upstream | 96515 | 27519987 ~ 27569509 (+) |
| G127775 | NA | non-coding | upstream | 237003 | 27424051 ~ 27429021 (+) |
| G127767 | NA | non-coding | upstream | 277206 | 27388542 ~ 27388818 (+) |
| G127699 | LOC106605528 | non-coding | upstream | 353528 | 27310567 ~ 27312496 (+) |
| G127697 | LOC106605528 | non-coding | upstream | 355984 | 27308528 ~ 27310040 (+) |
| G128163 | LOC106605482 | non-coding | downstream | 16072 | 27682434 ~ 27682656 (+) |
| G128165 | NA | non-coding | downstream | 19226 | 27685588 ~ 27685805 (+) |
| G128175 | NA | non-coding | downstream | 33880 | 27700242 ~ 27700863 (+) |
| G128178 | NA | non-coding | downstream | 40791 | 27707153 ~ 27707361 (+) |
| G128191 | NA | non-coding | downstream | 60453 | 27726815 ~ 27727018 (+) |
| LOC110485466 | LOC106605529 | other | upstream | 362469 | 27288172 ~ 27303644 (+) |
| G127644 | LOC106605534 | other | upstream | 475431 | 27189991 ~ 27190593 (+) |
| LOC110485212 | LOC106605536 | other | upstream | 505379 | 27147880 ~ 27175747 (+) |
| G127198 | LOC106605538 | other | upstream | 804782 | 26857698 ~ 26861242 (+) |
| G127190 | cf113 | other | upstream | 870262 | 26794210 ~ 26795762 (+) |
| G128185 | NA | other | downstream | 50120 | 27716482 ~ 27717163 (+) |
| G128436 | NA | other | downstream | 422285 | 28088647 ~ 28089445 (+) |
| G128490 | NA | other | downstream | 584480 | 28250842 ~ 28547915 (+) |
| LOC110485990 | LOC106579931 | other | downstream | 1265694 | 28931988 ~ 28951235 (+) |
| G128853 | LOC106605419 | other | downstream | 1273537 | 28939899 ~ 28981288 (+) |
