G128175


Basic Information

Item Value
gene id G128175
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 27700242 ~ 27700863 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU147857
ctgtgtccctgtgtgtagtcctgtccccgtgtccctgtgtgtagtcctgtccctgtgtgtagtcctgtctctgtgtccctgggtgtagtcctgtccctgtgtgtagtcctgtcccctgtgtccctgtgtgtagtcctaacctgtgtccctgtgtgtagtcctgtccctgtgtgtagtcctgtctctgtgtccctgggtGTAGttctgtccctgtgtccctgtgtgtagtccATGTGTCCCCGTGTGTAGTCCtaccctgtgtccctgtgtgtagtccctgtgtgtagtcctgtctctgtgtccctgtgtgtagtcctaccctgtgtccctgtgtgtagtcctgtctctgtgtccctgtgtgtagtccTACCCTGTGTCCCTGTGTATAGTCCTgaccctgtgtccctgtgtgtagtcctgtctctgtgtccctgtgtgtagtcctgtctctgtgtccctgtgtgtagccctgtctctgtgtctctgtgtccctgtgtgtagccctgtctctgtgtccgtgtgtgtagccctgtctctgtgtccctgtgtgtagccCTGTCTCGGTGTTCCTGTGTGTagccctgtctctgtgtccctgtgtgtatccctgtctctgtgtccc

Function

NR:

description
PREDICTED: mitogen-activated protein kinase-binding protein 1-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU147857 True 622 lncRNA 0.55 1 27700242 27700863

Neighbor

gene id symbol gene type direction distance location
LOC110485628 LOC106605483 coding upstream 22228 27651611 ~ 27678014 (+)
LOC110485563 LOC106579093 coding upstream 281077 27409765 ~ 27419165 (+)
LOC110485528 LOC106605545 coding upstream 291253 27403665 ~ 27408989 (+)
LOC110485543 LOC106579099 coding upstream 296817 27390590 ~ 27403425 (+)
LOC110485507 LOC106579115 coding upstream 319833 27331697 ~ 27380409 (+)
LOC110534576 dpys coding downstream 206926 27907789 ~ 27909986 (+)
LOC110485682 LOC106605395 coding downstream 464297 28165160 ~ 28171323 (+)
LOC110485672 LOC106605394 coding downstream 470983 28171846 ~ 28180205 (+)
ddr1 LOC106605397 coding downstream 493699 28194562 ~ 28250766 (+)
LOC110485735 LOC106605407 coding downstream 569388 28270251 ~ 28280280 (+)
G128165 NA non-coding upstream 14437 27685588 ~ 27685805 (+)
G128163 LOC106605482 non-coding upstream 17586 27682434 ~ 27682656 (+)
G128160 NA non-coding upstream 33880 27666024 ~ 27666362 (+)
G127824 NA non-coding upstream 130733 27519987 ~ 27569509 (+)
G127775 NA non-coding upstream 271221 27424051 ~ 27429021 (+)
G128178 NA non-coding downstream 6290 27707153 ~ 27707361 (+)
G128191 NA non-coding downstream 25952 27726815 ~ 27727018 (+)
G128192 NA non-coding downstream 26464 27727327 ~ 27727615 (+)
G128193 NA non-coding downstream 27808 27728671 ~ 27728872 (+)
G128196 NA non-coding downstream 30427 27731290 ~ 27731498 (+)
LOC110485466 LOC106605529 other upstream 396687 27288172 ~ 27303644 (+)
G127644 LOC106605534 other upstream 509649 27189991 ~ 27190593 (+)
LOC110485212 LOC106605536 other upstream 539597 27147880 ~ 27175747 (+)
G127198 LOC106605538 other upstream 839000 26857698 ~ 26861242 (+)
G127190 cf113 other upstream 904480 26794210 ~ 26795762 (+)
G128185 NA other downstream 15619 27716482 ~ 27717163 (+)
G128436 NA other downstream 387784 28088647 ~ 28089445 (+)
G128490 NA other downstream 549979 28250842 ~ 28547915 (+)
LOC110485990 LOC106579931 other downstream 1231193 28931988 ~ 28951235 (+)
G128853 LOC106605419 other downstream 1239036 28939899 ~ 28981288 (+)

Expression


Co-expression Network