G128217


Basic Information

Item Value
gene id G128217
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 27766157 ~ 27766532 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU147899
ccacacagccaggtctctgacctcctccctataggctgtcttgtcgttgtcggtgatcaggcctaccactactGTGTCAtcggtaaacttaatgatggtgttggagtcgtgcctggccgtgcagtcatgagagaatagggagtacaggaggggactgagcatgcacccctgaggggcccctgtgttgaggatcagcgtggcggatgtgttgttatctacccttaccacctgggggcagcccatcaggaagtccaggatccagtttcagagggaggtgtttagtcccagggtccttagcttattgatgagctttgagggcactatggtgttgaacgctgagttgtagtcaatgaatagcattctcacataggtgttc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU147899 True 376 lncRNA 0.53 1 27766157 27766532

Neighbor

gene id symbol gene type direction distance location
LOC110485628 LOC106605483 coding upstream 88143 27651611 ~ 27678014 (+)
LOC110485563 LOC106579093 coding upstream 346992 27409765 ~ 27419165 (+)
LOC110485528 LOC106605545 coding upstream 357168 27403665 ~ 27408989 (+)
LOC110485543 LOC106579099 coding upstream 362732 27390590 ~ 27403425 (+)
LOC110485507 LOC106579115 coding upstream 385748 27331697 ~ 27380409 (+)
LOC110534576 dpys coding downstream 141257 27907789 ~ 27909986 (+)
LOC110485682 LOC106605395 coding downstream 398628 28165160 ~ 28171323 (+)
LOC110485672 LOC106605394 coding downstream 405314 28171846 ~ 28180205 (+)
ddr1 LOC106605397 coding downstream 428030 28194562 ~ 28250766 (+)
LOC110485735 LOC106605407 coding downstream 503719 28270251 ~ 28280280 (+)
G128206 NA non-coding upstream 15839 27750106 ~ 27750318 (+)
G128203 NA non-coding upstream 19610 27746274 ~ 27746547 (+)
G128196 NA non-coding upstream 34659 27731290 ~ 27731498 (+)
G128193 NA non-coding upstream 37285 27728671 ~ 27728872 (+)
G128192 NA non-coding upstream 38542 27727327 ~ 27727615 (+)
G128221 NA non-coding downstream 3913 27770445 ~ 27770678 (+)
G128223 NA non-coding downstream 5947 27772479 ~ 27772822 (+)
G128225 NA non-coding downstream 7806 27774338 ~ 27774540 (+)
G128231 NA non-coding downstream 17767 27784299 ~ 27784571 (+)
G128233 NA non-coding downstream 20252 27786784 ~ 27787355 (+)
G128185 NA other upstream 48994 27716482 ~ 27717163 (+)
LOC110485466 LOC106605529 other upstream 462602 27288172 ~ 27303644 (+)
G127644 LOC106605534 other upstream 575564 27189991 ~ 27190593 (+)
LOC110485212 LOC106605536 other upstream 605512 27147880 ~ 27175747 (+)
G127198 LOC106605538 other upstream 904915 26857698 ~ 26861242 (+)
G128436 NA other downstream 322115 28088647 ~ 28089445 (+)
G128490 NA other downstream 484310 28250842 ~ 28547915 (+)
LOC110485990 LOC106579931 other downstream 1165524 28931988 ~ 28951235 (+)
G128853 LOC106605419 other downstream 1173367 28939899 ~ 28981288 (+)
LOC110534631 LOC106580029 other downstream 1711085 29424822 ~ 29478401 (+)

Expression


Co-expression Network