Gene
RNA
| Item | Value |
|---|---|
| gene id | G128233 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 27786784 ~ 27787355 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| zinc finger protein ZFPM2-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU147915 | True | 572 | lncRNA | 0.44 | 1 | 27786784 | 27787355 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110485628 | LOC106605483 | coding | upstream | 108770 | 27651611 ~ 27678014 (+) |
| LOC110485563 | LOC106579093 | coding | upstream | 367619 | 27409765 ~ 27419165 (+) |
| LOC110485528 | LOC106605545 | coding | upstream | 377795 | 27403665 ~ 27408989 (+) |
| LOC110485543 | LOC106579099 | coding | upstream | 383359 | 27390590 ~ 27403425 (+) |
| LOC110485507 | LOC106579115 | coding | upstream | 406375 | 27331697 ~ 27380409 (+) |
| LOC110534576 | dpys | coding | downstream | 120434 | 27907789 ~ 27909986 (+) |
| LOC110485682 | LOC106605395 | coding | downstream | 377805 | 28165160 ~ 28171323 (+) |
| LOC110485672 | LOC106605394 | coding | downstream | 384491 | 28171846 ~ 28180205 (+) |
| ddr1 | LOC106605397 | coding | downstream | 407207 | 28194562 ~ 28250766 (+) |
| LOC110485735 | LOC106605407 | coding | downstream | 482896 | 28270251 ~ 28280280 (+) |
| G128231 | NA | non-coding | upstream | 2213 | 27784299 ~ 27784571 (+) |
| G128225 | NA | non-coding | upstream | 12244 | 27774338 ~ 27774540 (+) |
| G128223 | NA | non-coding | upstream | 13962 | 27772479 ~ 27772822 (+) |
| G128221 | NA | non-coding | upstream | 16106 | 27770445 ~ 27770678 (+) |
| G128217 | NA | non-coding | upstream | 20252 | 27766157 ~ 27766532 (+) |
| G128238 | NA | non-coding | downstream | 8528 | 27795883 ~ 27823902 (+) |
| G128308 | NA | non-coding | downstream | 116620 | 27903975 ~ 27905726 (+) |
| G128319 | NA | non-coding | downstream | 131075 | 27918430 ~ 27918637 (+) |
| G128322 | NA | non-coding | downstream | 135800 | 27923155 ~ 27923430 (+) |
| G128324 | NA | non-coding | downstream | 139916 | 27927271 ~ 27927495 (+) |
| G128185 | NA | other | upstream | 69621 | 27716482 ~ 27717163 (+) |
| LOC110485466 | LOC106605529 | other | upstream | 483229 | 27288172 ~ 27303644 (+) |
| G127644 | LOC106605534 | other | upstream | 596191 | 27189991 ~ 27190593 (+) |
| LOC110485212 | LOC106605536 | other | upstream | 626139 | 27147880 ~ 27175747 (+) |
| G127198 | LOC106605538 | other | upstream | 925542 | 26857698 ~ 26861242 (+) |
| G128436 | NA | other | downstream | 301292 | 28088647 ~ 28089445 (+) |
| G128490 | NA | other | downstream | 463487 | 28250842 ~ 28547915 (+) |
| LOC110485990 | LOC106579931 | other | downstream | 1144701 | 28931988 ~ 28951235 (+) |
| G128853 | LOC106605419 | other | downstream | 1152544 | 28939899 ~ 28981288 (+) |
| LOC110534631 | LOC106580029 | other | downstream | 1690262 | 29424822 ~ 29478401 (+) |
