G128308


Basic Information

Item Value
gene id G128308
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 27903975 ~ 27905726 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU147995
GTGTATCTTTATCTATGGAACTTAAACCCTGTTCCGCGTATCTTTATCCATTGAACCTAAACCCTGTTCCGTGTATCTCTATCAATTGAACCTAAACCCTGTTCCGTGTATCTCTATCCATTGAACTTAAACCCTGTTCCGTGGATCTCTTTCCATTGAATTTAAACTGTGTTCCGTGTATCTCTACCATGGAACCTAAACCCTGTTCTGTGTATCTTTATCCATTGAACCTAAACCCTGTTCCGTGTATCTCTATCCATGGAACTTAAACCTTGTTCCGTGTATCTTTATCCATGGAACCTAAACCCTGTTCCGTGTATCTTCATCTATGGAACCTAAACCCTGTTCCGTGTATCTCTATCTATGGAACTTAAACGCTGTTCCGTGTATCTTTATCTATGGAACCTAAACCCTGTTCTGTGTATCTTTATACGTGGAACCTAAACCCTGTTCTGTGTATCTCTATCCATTGAACTTAACCCTGTTCTGTGTATCTTTATCTATGAAACCTAAACCCTGTTCCGTGTATCTCTATCCATTGAACTTAACCCTGTTCCGTGTACCTTTATCTATGGAACTTAATCCGTGTTCCGTGTATCTCTATCCATTGAACCTGAACCCTGTTCTGTGTATCTCTATCTATGGACCCTAAACCCTGTTCCGTGTATCTCTATCTATTGAACCTAAACCCTGTTCCGTGTATCTCTATCCATTGAACTTAACCCTGTTCTGTGTATCTTCATCTATGGAACCTAAACCCTGTTCTGTGTATCTTTATCTGTGGAACCTAAACCCTGTTCCGTGTATCTTTATCTATGGAACCTAACCCCTGTTCCGTGTATCTTTTTCCATTGAATTTAAACTGTGTTCCGTGAATCTCTAACAAATGAACCTAAACCCTGTTCCGTGTATCCATTGAACTTAAACCCTGTTCCGTGTATCTCTATCCATGTAACCTGAACCCTGTTctgtgtatctgtatctatggaaCCTAAACCATGTTCCGTGTATCTTTATCTATGGAACCTAAACCCTGTTCTGTGTATCTTTATCCATTGAACCTAAACCCTGTGCCGTGTATCTCTATCCATGGAACTTAAACCTTGTTCCATGTATCTTTATCCATGGAACCTAAACCCTGTTCCGTGTATCTTCATCTATGGAACCTAAACCCAGTTCCGTGTATCTCTATCTATGGAACTTAAACCCTGTTCCGTGTATCTTTATCTATGGAACCTAAACCCTGTTCTGTGTATCTTTATATGTGGAACCTAAACCCTGTTCTGTGTATCTCTATCTATGGAACCTAAACCCTGTTCTGTGTATCTCTATCCATTGAACTTAACCCTGTTCTGTGTATCTCTATCCATGGAACCTAAACCCTGTTCTGTGTATCTTTATCTATGGAACCTAAACCCTGTTCCGTGTCTTTTTCCATTGAATTTAAACTGTGTTCTGTGAATCTTTATCTATGGAACCTAAACCCTGTTCTGTGTATCTCTATTAATTGAACCTCAACCCTGTTCCGTGTATCTCTATCCATTGAACCGAAACCCTGTTCCGTGTATCTCTATCCATGGAACCTAAACCCTGTTCCGTGTATCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU147995 True 1606 lncRNA 0.48 2 27903975 27905726

Neighbor

gene id symbol gene type direction distance location
LOC110485628 LOC106605483 coding upstream 225961 27651611 ~ 27678014 (+)
LOC110485563 LOC106579093 coding upstream 484810 27409765 ~ 27419165 (+)
LOC110485528 LOC106605545 coding upstream 494986 27403665 ~ 27408989 (+)
LOC110485543 LOC106579099 coding upstream 500550 27390590 ~ 27403425 (+)
LOC110485507 LOC106579115 coding upstream 523566 27331697 ~ 27380409 (+)
LOC110534576 dpys coding downstream 2063 27907789 ~ 27909986 (+)
LOC110485682 LOC106605395 coding downstream 259434 28165160 ~ 28171323 (+)
LOC110485672 LOC106605394 coding downstream 266120 28171846 ~ 28180205 (+)
ddr1 LOC106605397 coding downstream 288836 28194562 ~ 28250766 (+)
LOC110485735 LOC106605407 coding downstream 364525 28270251 ~ 28280280 (+)
G128238 NA non-coding upstream 80073 27795883 ~ 27823902 (+)
G128233 NA non-coding upstream 116620 27786784 ~ 27787355 (+)
G128231 NA non-coding upstream 119404 27784299 ~ 27784571 (+)
G128225 NA non-coding upstream 129435 27774338 ~ 27774540 (+)
G128223 NA non-coding upstream 131153 27772479 ~ 27772822 (+)
G128319 NA non-coding downstream 12704 27918430 ~ 27918637 (+)
G128322 NA non-coding downstream 17429 27923155 ~ 27923430 (+)
G128324 NA non-coding downstream 21545 27927271 ~ 27927495 (+)
G128368 NA non-coding downstream 85577 27991303 ~ 28022887 (+)
G128376 NA non-coding downstream 99137 28004863 ~ 28005343 (+)
G128185 NA other upstream 186812 27716482 ~ 27717163 (+)
LOC110485466 LOC106605529 other upstream 600420 27288172 ~ 27303644 (+)
G127644 LOC106605534 other upstream 713382 27189991 ~ 27190593 (+)
LOC110485212 LOC106605536 other upstream 743330 27147880 ~ 27175747 (+)
G127198 LOC106605538 other upstream 1042733 26857698 ~ 26861242 (+)
G128436 NA other downstream 182921 28088647 ~ 28089445 (+)
G128490 NA other downstream 345116 28250842 ~ 28547915 (+)
LOC110485990 LOC106579931 other downstream 1026330 28931988 ~ 28951235 (+)
G128853 LOC106605419 other downstream 1034173 28939899 ~ 28981288 (+)
LOC110534631 LOC106580029 other downstream 1571891 29424822 ~ 29478401 (+)

Expression


Co-expression Network