G128319


Basic Information

Item Value
gene id G128319
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 27918430 ~ 27918637 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU148006
GTACCAGGCTCTGCCTCCCAGGGAAACATGGGTGATTCGTAACCAAGTACACACTGAAATTAAGTAAGGTGGAGGGATGAATGCATGAGTGAGTTTTGAGCATATTCGGTACAGGCCATATACGGACTCCAGTCATGTGGAGAGGCAGAACATTGTTGGCGGAGGTACTTCCCTATTTCTTGGTTCAGGCGTTCCGTCTGCCCATTGG

Function

NR:

description
PREDICTED: uncharacterized protein LOC107594753

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU148006 True 208 lncRNA 0.50 1 27918430 27918637

Neighbor

gene id symbol gene type direction distance location
LOC110534576 dpys coding upstream 8444 27907789 ~ 27909986 (+)
LOC110485628 LOC106605483 coding upstream 240416 27651611 ~ 27678014 (+)
LOC110485563 LOC106579093 coding upstream 499265 27409765 ~ 27419165 (+)
LOC110485528 LOC106605545 coding upstream 509441 27403665 ~ 27408989 (+)
LOC110485543 LOC106579099 coding upstream 515005 27390590 ~ 27403425 (+)
LOC110485682 LOC106605395 coding downstream 246523 28165160 ~ 28171323 (+)
LOC110485672 LOC106605394 coding downstream 253209 28171846 ~ 28180205 (+)
ddr1 LOC106605397 coding downstream 275925 28194562 ~ 28250766 (+)
LOC110485735 LOC106605407 coding downstream 351614 28270251 ~ 28280280 (+)
LOC110485723 LOC106605400 coding downstream 362475 28281112 ~ 28296740 (+)
G128308 NA non-coding upstream 12704 27903975 ~ 27905726 (+)
G128238 NA non-coding upstream 94528 27795883 ~ 27823902 (+)
G128233 NA non-coding upstream 131075 27786784 ~ 27787355 (+)
G128231 NA non-coding upstream 133859 27784299 ~ 27784571 (+)
G128225 NA non-coding upstream 143890 27774338 ~ 27774540 (+)
G128322 NA non-coding downstream 4518 27923155 ~ 27923430 (+)
G128324 NA non-coding downstream 8634 27927271 ~ 27927495 (+)
G128368 NA non-coding downstream 72666 27991303 ~ 28022887 (+)
G128376 NA non-coding downstream 86226 28004863 ~ 28005343 (+)
G128411 NA non-coding downstream 132808 28051445 ~ 28051738 (+)
G128185 NA other upstream 201267 27716482 ~ 27717163 (+)
LOC110485466 LOC106605529 other upstream 614875 27288172 ~ 27303644 (+)
G127644 LOC106605534 other upstream 727837 27189991 ~ 27190593 (+)
LOC110485212 LOC106605536 other upstream 757785 27147880 ~ 27175747 (+)
G127198 LOC106605538 other upstream 1057188 26857698 ~ 26861242 (+)
G128436 NA other downstream 170010 28088647 ~ 28089445 (+)
G128490 NA other downstream 332205 28250842 ~ 28547915 (+)
LOC110485990 LOC106579931 other downstream 1013419 28931988 ~ 28951235 (+)
G128853 LOC106605419 other downstream 1021262 28939899 ~ 28981288 (+)
LOC110534631 LOC106580029 other downstream 1558980 29424822 ~ 29478401 (+)

Expression


Co-expression Network