Gene
RNA
| Item | Value |
|---|---|
| gene id | G128322 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 27923155 ~ 27923430 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: tripartite motif-containing protein 35-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU148010 | True | 276 | lncRNA | 0.48 | 1 | 27923155 | 27923430 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110534576 | dpys | coding | upstream | 13169 | 27907789 ~ 27909986 (+) |
| LOC110485628 | LOC106605483 | coding | upstream | 245141 | 27651611 ~ 27678014 (+) |
| LOC110485563 | LOC106579093 | coding | upstream | 503990 | 27409765 ~ 27419165 (+) |
| LOC110485528 | LOC106605545 | coding | upstream | 514166 | 27403665 ~ 27408989 (+) |
| LOC110485543 | LOC106579099 | coding | upstream | 519730 | 27390590 ~ 27403425 (+) |
| LOC110485682 | LOC106605395 | coding | downstream | 241730 | 28165160 ~ 28171323 (+) |
| LOC110485672 | LOC106605394 | coding | downstream | 248416 | 28171846 ~ 28180205 (+) |
| ddr1 | LOC106605397 | coding | downstream | 271132 | 28194562 ~ 28250766 (+) |
| LOC110485735 | LOC106605407 | coding | downstream | 346821 | 28270251 ~ 28280280 (+) |
| LOC110485723 | LOC106605400 | coding | downstream | 357682 | 28281112 ~ 28296740 (+) |
| G128319 | NA | non-coding | upstream | 4518 | 27918430 ~ 27918637 (+) |
| G128308 | NA | non-coding | upstream | 17429 | 27903975 ~ 27905726 (+) |
| G128238 | NA | non-coding | upstream | 99253 | 27795883 ~ 27823902 (+) |
| G128233 | NA | non-coding | upstream | 135800 | 27786784 ~ 27787355 (+) |
| G128231 | NA | non-coding | upstream | 138584 | 27784299 ~ 27784571 (+) |
| G128324 | NA | non-coding | downstream | 3841 | 27927271 ~ 27927495 (+) |
| G128368 | NA | non-coding | downstream | 67873 | 27991303 ~ 28022887 (+) |
| G128376 | NA | non-coding | downstream | 81433 | 28004863 ~ 28005343 (+) |
| G128411 | NA | non-coding | downstream | 128015 | 28051445 ~ 28051738 (+) |
| G128415 | NA | non-coding | downstream | 133055 | 28056485 ~ 28056701 (+) |
| G128185 | NA | other | upstream | 205992 | 27716482 ~ 27717163 (+) |
| LOC110485466 | LOC106605529 | other | upstream | 619600 | 27288172 ~ 27303644 (+) |
| G127644 | LOC106605534 | other | upstream | 732562 | 27189991 ~ 27190593 (+) |
| LOC110485212 | LOC106605536 | other | upstream | 762510 | 27147880 ~ 27175747 (+) |
| G127198 | LOC106605538 | other | upstream | 1061913 | 26857698 ~ 26861242 (+) |
| G128436 | NA | other | downstream | 165217 | 28088647 ~ 28089445 (+) |
| G128490 | NA | other | downstream | 327412 | 28250842 ~ 28547915 (+) |
| LOC110485990 | LOC106579931 | other | downstream | 1008626 | 28931988 ~ 28951235 (+) |
| G128853 | LOC106605419 | other | downstream | 1016469 | 28939899 ~ 28981288 (+) |
| LOC110534631 | LOC106580029 | other | downstream | 1554187 | 29424822 ~ 29478401 (+) |
