G129403


Basic Information

Item Value
gene id G129403
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 27996124 ~ 27997088 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU149177
cggagagggagagtcagagagacggagggagggagagtcagagagacggagaggcTCAGAGCCCCGGGTGAGTCGCTGCGGCCCCTGAGAACAGGTCCCTGCCAGCACAGTAGATCTAGACAGTGACCTTGGATAGACGCCATGCTTCTCACACTGTTGGCTGTAGAACTAGACTAAAGTATTTGACTGTCCCGAATGGCATCCTACTCCCTTTATAgaggactacttttgaccagggcccacagggttgAGATAGCAAGTCTATATTGAGTGGGACCTCATATTGTAGCTGCTTCAGTAGATGTATAGTTTTAGCAGGAGGAATGCAGTGGGAGACAAGGTAATAACAGTGTAGATGTTACAGTAGATGTATAGTTTTAGCAGGAGGAATGCAGTGGGAGACAAGGTAATAACAGTGTAGATGTTACAGTAGATGTATAGTTTTAGCAGGAGGAATGCAGTGGGAGACAAGGTAATAACAGTGTAGATGTTACAGTAGCACCGGTGCTGTAGTCGATCTAACTAGACTTTTAATGTTTCTACTGTGCAACAAAGGTGTGCAAAGTATTATCTGAGTATATACTAACCACACCAGACTTGGGCTGTTTGAATTAGTATTTTGACCGGTTTGAAATCCCAAGGGAATATcctgaacagtagagagagagcgcgagctaTGGTGATTCCGACATCTCCTTTACTGTTCAAAGCCATAAGTCTCTGGACATAACGACCTGAGGTTCGTAGACCACAAATGATTATGATGATGGTCACCAACGTTAAAGTCTCAGGCAACGTAAGGTCGTTCACTGGCTGATGAAGTGGCTGTGTTGCGATTGGGTGGGTTACAACTGGAGTGACCGCTGTATTGCGATTGGCTGGTGTTGAACAGGAGTGAC
>TU149178
cggagagggagagtcagagagacggagggagggagagtcagagagacggagaggcTCAGAGCCCCGGGTGAGTCGCTGCGGCCCCTGAGAACAGGTCCCTGCCAGCACAGTAGATCTAGACAGTGACCTTGGATAGACGCCATGCTTCTCACACTGTTGGCTGTAGAACTAGACTAAAGTATTTGACTGTCCCGAATGGCATCCTACTCCCTTTATAgaggactacttttgaccagggcccacagggttgAGATAGCAAGTCTATATTGAGTGGGACCTCATATTGTAGCTGCTTCAGTAGATGTATAGTTTTAGCAGGAGGAATGCAGTGGGAGACAAGGTAATAACAGTGTAGATGTTACAGTAGATGTATAGTTTTAGCAGGAGGAATGCAGTGGGAGACAAGGTAATAACAGTGTAGATGTTACAGTAGATGTATAGTTTTAGCAGGAGGAATGCAGTGGGAGACAAGGTAATAACAGTGTAGATGTTACAGTAGCACCGGTGCTGTAGTCGATCTAACTAGACTTTTAATGTTTCTACTGTGCAACAAAGGTGTGCAAAGTATTATCTGAGTATATACTAACCACACCAGACTTGGGCTGTTTGAATTAGTATTTTGACCGGTTTGAAATCCCAAGGGAATATcctgaacagtagagagagagcgcgagctaTGGTGATTCCGACATCTCCTTTACTGTTCAAAGCCATAAGTCTCTGGACATAACGACCTGAGGTTCGTAGACCACAAATGATTATGATGATGGTCACCAACGTTAAAGTCTCAGGCAACGTAAGGTCGTTCACTGGCTGATGAAGTGGCTGTGTTGCGATTGGGTGGGTTACAACTGGAGTGACCGCTGTATTGCGATTGGCTGGTGTTGAACAGGAGTGAC

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU149177 False 899 lncRNA 0.46 2 27996124 27997088
TU149178 True 899 lncRNA 0.46 2 27996124 27997088

Neighbor

gene id symbol gene type direction distance location
LOC110534585 LOC106605382 coding downstream 66308 27927664 ~ 27931710 (-)
LOC110485644 LOC106579058 coding downstream 171011 27678308 ~ 27825113 (-)
LOC110485571 oxr1 coding downstream 363014 27419646 ~ 27633110 (-)
LOC110533720 LOC106605543 coding downstream 610645 27381341 ~ 27385479 (-)
LOC110485483 LOC106605528 coding downstream 678405 27308514 ~ 27317719 (-)
LOC110485705 LOC106605396 coding upstream 155401 28152489 ~ 28164855 (-)
LOC110485712 LOC106605398 coding upstream 255537 28252625 ~ 28265466 (-)
LOC110485793 LOC106605408 coding upstream 320957 28318045 ~ 28329196 (-)
LOC110485762 LOC106605404 coding upstream 359311 28356399 ~ 28373544 (-)
g6f-like-a g6f-like-a coding upstream 380730 28377818 ~ 28401529 (-)
G129397 NA non-coding downstream 16038 27978482 ~ 27980086 (-)
G129346 NA non-coding downstream 68627 27927271 ~ 27927497 (-)
G129371 NA non-coding downstream 72208 27923497 ~ 27923916 (-)
G129368 NA non-coding downstream 76367 27919493 ~ 27919757 (-)
G129434 NA non-coding upstream 48207 28045295 ~ 28045512 (-)
G129443 NA non-coding upstream 62554 28059642 ~ 28059858 (-)
G129444 NA non-coding upstream 62913 28060001 ~ 28060484 (-)
G129445 NA non-coding upstream 64857 28061945 ~ 28062221 (-)
G129446 NA non-coding upstream 70705 28067793 ~ 28068013 (-)
G129250 NA other downstream 229592 27766157 ~ 27766532 (-)
LOC110485245 ubr5 other downstream 718000 27231538 ~ 27278158 (-)
LOC110539285 LOC106579350 other downstream 1333110 26641958 ~ 26675649 (-)
G127083 NA other downstream 1433997 26561614 ~ 26562127 (-)
G125305 NA other downstream 3219497 24775220 ~ 24776627 (-)
LOC110485663 LOC106579570 other upstream 99594 27933389 ~ 28149986 (-)
G129582 NA other upstream 313231 28310319 ~ 28310732 (-)
LOC110534614 LOC106605399 other upstream 480098 28475823 ~ 28533709 (-)
LOC110486376 LOC106605451 other upstream 1871958 29859575 ~ 29878744 (-)
c2h8orf37 cssa05h8orf37 other upstream 2892605 30889693 ~ 30896340 (-)

Expression


Co-expression Network