G128415


Basic Information

Item Value
gene id G128415
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 28056485 ~ 28056701 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU148108
AACCAGGAGAATCAACTCGTATTAGAACCAGGAGAATCAGGTAGTATGAGAACCAGGAAATCAACTCGTATTAGAACCAGGAGAATCAGGTAGTATGAGAACCAGGAGAATCAGGTAGTATGAGAAGCAGGAGAATCAGGTAGTATGAGAAGCAGGAGAATCAGGTAGTATGAGAACCAGGAAATCAACTCGTATTAGAACCAGGAGAATCAGGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU148108 True 217 lncRNA 0.51 1 28056485 28056701

Neighbor

gene id symbol gene type direction distance location
LOC110534576 dpys coding upstream 146499 27907789 ~ 27909986 (+)
LOC110485628 LOC106605483 coding upstream 378471 27651611 ~ 27678014 (+)
LOC110485563 LOC106579093 coding upstream 637320 27409765 ~ 27419165 (+)
LOC110485528 LOC106605545 coding upstream 647496 27403665 ~ 27408989 (+)
LOC110485543 LOC106579099 coding upstream 653060 27390590 ~ 27403425 (+)
LOC110485682 LOC106605395 coding downstream 108459 28165160 ~ 28171323 (+)
LOC110485672 LOC106605394 coding downstream 115145 28171846 ~ 28180205 (+)
ddr1 LOC106605397 coding downstream 137861 28194562 ~ 28250766 (+)
LOC110485735 LOC106605407 coding downstream 213550 28270251 ~ 28280280 (+)
LOC110485723 LOC106605400 coding downstream 224411 28281112 ~ 28296740 (+)
G128411 NA non-coding upstream 4747 28051445 ~ 28051738 (+)
G128368 NA non-coding upstream 33598 27991303 ~ 28022887 (+)
G128376 NA non-coding upstream 51142 28004863 ~ 28005343 (+)
G128324 NA non-coding upstream 128990 27927271 ~ 27927495 (+)
G128322 NA non-coding upstream 133055 27923155 ~ 27923430 (+)
G128421 NA non-coding downstream 13095 28069796 ~ 28070042 (+)
G128423 NA non-coding downstream 17060 28073761 ~ 28074607 (+)
G128431 LOC106605392 non-coding downstream 27467 28084168 ~ 28084780 (+)
G128438 NA non-coding downstream 35717 28092418 ~ 28092998 (+)
G128459 NA non-coding downstream 83577 28140278 ~ 28140905 (+)
G128185 NA other upstream 339322 27716482 ~ 27717163 (+)
LOC110485466 LOC106605529 other upstream 752930 27288172 ~ 27303644 (+)
G127644 LOC106605534 other upstream 865892 27189991 ~ 27190593 (+)
LOC110485212 LOC106605536 other upstream 895840 27147880 ~ 27175747 (+)
G127198 LOC106605538 other upstream 1195243 26857698 ~ 26861242 (+)
G128436 NA other downstream 31946 28088647 ~ 28089445 (+)
G128490 NA other downstream 194141 28250842 ~ 28547915 (+)
LOC110485990 LOC106579931 other downstream 875355 28931988 ~ 28951235 (+)
G128853 LOC106605419 other downstream 883198 28939899 ~ 28981288 (+)
LOC110534631 LOC106580029 other downstream 1420916 29424822 ~ 29478401 (+)

Expression


Co-expression Network