G129468



Basic Information


Item Value
gene id G129468
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 28090033 ~ 28090268 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU149243
ttggttgaaggcatgctgttgtgcaactgactaggtatctcgcTGAGTAAAGATTTTTACACTATTTTAGCTGAACAGTGTATCACTTCAAATCAAAATCttttttttattggtcacatacacatggttagcagatgttaatgtgagcgtagcgaaatgcttgtgcttctagttccaacagtgcagtaatatctaacaagcaatCTAACATTTCCCAATAACTACCTAATACCaac

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU149243 True 236 lncRNA 0.50 1 28090033 28090268

Neighbor


gene id symbol gene type direction distance location
LOC110534585 LOC106605382 coding downstream 160217 27927664 ~ 27931710 (-)
LOC110485644 LOC106579058 coding downstream 264920 27678308 ~ 27825113 (-)
LOC110485571 oxr1 coding downstream 456923 27419646 ~ 27633110 (-)
LOC110533720 LOC106605543 coding downstream 704554 27381341 ~ 27385479 (-)
LOC110485483 LOC106605528 coding downstream 772314 27308514 ~ 27317719 (-)
LOC110485705 LOC106605396 coding upstream 62221 28152489 ~ 28164855 (-)
LOC110485712 LOC106605398 coding upstream 162357 28252625 ~ 28265466 (-)
LOC110485793 LOC106605408 coding upstream 227777 28318045 ~ 28329196 (-)
LOC110485762 LOC106605404 coding upstream 266131 28356399 ~ 28373544 (-)
g6f-like-a g6f-like-a coding upstream 287550 28377818 ~ 28401529 (-)
G129466 NA non-coding downstream 4251 28085504 ~ 28085782 (-)
G129465 NA non-coding downstream 4895 28084905 ~ 28085138 (-)
G129455 NA non-coding downstream 9291 28080436 ~ 28080742 (-)
G129454 NA non-coding downstream 9831 28079863 ~ 28080202 (-)
G129453 NA non-coding downstream 12703 28077105 ~ 28077330 (-)
G129471 NA non-coding upstream 2885 28093153 ~ 28093358 (-)
G129464 znf384l non-coding upstream 77676 28167944 ~ 28168394 (-)
G129459 LOC106605395 non-coding upstream 79745 28170013 ~ 28171317 (-)
G129507 NA non-coding upstream 101068 28191336 ~ 28191543 (-)
G129547 NA non-coding upstream 140339 28230607 ~ 28232398 (-)
G129250 NA other downstream 323501 27766157 ~ 27766532 (-)
LOC110485245 ubr5 other downstream 811909 27231538 ~ 27278158 (-)
LOC110539285 LOC106579350 other downstream 1427019 26641958 ~ 26675649 (-)
G127083 NA other downstream 1527906 26561614 ~ 26562127 (-)
G125305 NA other downstream 3313406 24775220 ~ 24776627 (-)
LOC110485663 LOC106579570 other upstream 6414 27933389 ~ 28149986 (-)
G129582 NA other upstream 220051 28310319 ~ 28310732 (-)
LOC110534614 LOC106605399 other upstream 386918 28475823 ~ 28533709 (-)
LOC110486376 LOC106605451 other upstream 1778778 29859575 ~ 29878744 (-)
c2h8orf37 cssa05h8orf37 other upstream 2799425 30889693 ~ 30896340 (-)

Expression



Co-expression Network