G129547



Basic Information


Item Value
gene id G129547
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 28230607 ~ 28232398 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU149326
cagacagacagacagacagagagtcagacagagagtcagacagagagtcagacagagagtcagacagagagtcagacagatagacagatagacagatagacagTGTGACTCACCGTTCCACAGACAGCCATAGAGCTCCACTCGTAGACAGACGCTCATGACCCGGTCTGCCAGGGGGTAGAAGCGGACATAACGGGCAACAATGGGTGGACCCAGGTCCTTCAGAACCACATCATAGGTGTTCTCATTCCCAG

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU149326 True 254 lncRNA 0.38 2 28230607 28232398

Neighbor


gene id symbol gene type direction distance location
LOC110485705 LOC106605396 coding downstream 65752 28152489 ~ 28164855 (-)
LOC110485663 LOC106579570 coding downstream 80632 27933389 ~ 28149986 (-)
LOC110534585 LOC106605382 coding downstream 300791 27927664 ~ 27931710 (-)
LOC110485644 LOC106579058 coding downstream 405494 27678308 ~ 27825113 (-)
LOC110485571 oxr1 coding downstream 597497 27419646 ~ 27633110 (-)
LOC110485712 LOC106605398 coding upstream 20227 28252625 ~ 28265466 (-)
LOC110485793 LOC106605408 coding upstream 85647 28318045 ~ 28329196 (-)
LOC110485762 LOC106605404 coding upstream 124001 28356399 ~ 28373544 (-)
g6f-like-a g6f-like-a coding upstream 145420 28377818 ~ 28401529 (-)
LOC110485830 LOC106605406 coding upstream 237311 28468401 ~ 28471494 (-)
G129507 NA non-coding downstream 39064 28191336 ~ 28191543 (-)
G129459 LOC106605395 non-coding downstream 59290 28170013 ~ 28171317 (-)
G129464 znf384l non-coding downstream 62213 28167944 ~ 28168394 (-)
G129471 NA non-coding downstream 137249 28093153 ~ 28093358 (-)
G129468 NA non-coding downstream 140339 28090033 ~ 28090268 (-)
G129572 LOC106605400 non-coding upstream 58133 28290531 ~ 28291251 (-)
G129582 NA non-coding upstream 77921 28310319 ~ 28310732 (-)
G129588 ino80e non-coding upstream 99297 28331695 ~ 28334476 (-)
G129631 LOC106605406 non-coding upstream 203568 28435966 ~ 28450726 (-)
G129250 NA other downstream 464075 27766157 ~ 27766532 (-)
LOC110485245 ubr5 other downstream 952483 27231538 ~ 27278158 (-)
LOC110539285 LOC106579350 other downstream 1567593 26641958 ~ 26675649 (-)
G127083 NA other downstream 1668480 26561614 ~ 26562127 (-)
LOC110534614 LOC106605399 other upstream 244788 28475823 ~ 28533709 (-)
LOC110486376 LOC106605451 other upstream 1636648 29859575 ~ 29878744 (-)
c2h8orf37 cssa05h8orf37 other upstream 2657295 30889693 ~ 30896340 (-)
trnae-cuc LOC106605367 other upstream 2664628 30897026 ~ 30899564 (-)

Expression



Co-expression Network