G128490


Basic Information

Item Value
gene id G128490
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 28250842 ~ 28547915 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU148197
TTTGAGTTAGGAAAGAGCGTTTGTGTTTATATAAATGTTACAATAATTTCATAACTTAGTGCACTTGAATTCAAAGTTtacactacagtgccttgcaatagtattcatcccccttggtgtttttactattttgttgcattacaacctgtaatttaaatggatttcatgtaatgaacatacaaaatagtccaaattggtgaagtgaaatttaaaaaaataacttgcttcaaaaaaaaataaaaacgtaaAAGTGGTGTgttcatatgtattcaccccctttgctatgaagcccccaaataagatctggtgcaaccaactaccttagtcacataattagttagattgcacacaggtggactttatttaagtgtcacatgacctcagtgtgtatacatacacatctgttctgaaaggccccaaagTCTGTAacaccacaaagaccaaggaggtcagggacaaagttgtggagaagtacagatcagggttgaattattaaaaaaatatcccaaactttaaaacatcccacagagcaccattaaatccattataaaaaaattgaaagaatatggcaccaaaactcacagaccaggtaaggagggcattaatcagagaggcaacaaagagagcaaagataaccctgaaggagctgcaaagctccacagtggagattggagtatctgtttaTAGGCCCACTTTAAGccttacactccacagagctgggctttacggaagagtggccagaaaaagacattgcttaaaagaaacaaaaataatcAAACaggtttggtgttcaccaaacggcatgtgggagactccccaaacatatggaagaaggtactctggtcagatgagactaaaattgtccatcaaggaaaacactatgtctggcgcaaacccaaaacctctcatcaccccgagaacaccatgttttttttcatcagcagggactggggaaactggtcagaattgaaggaatgatggatggtgctaaatacaggaaaattcttgaggggaaacctgtttcagtcttccagagatttgagactgggacaatgaccctaagcatactgctaaagcaacatttaaatgtcttggaatggcctagtcaaagcccagacctcaatccagttgagaatctgtggtatgacttaaagattgctgtacaccagcggaacccatccaacttgaaggagctggagcagttttgccttgaagaatgggcaaaaatcccagtggctagatgtctTAAGCTcgtagagacataccccaagagacttgcagctgtaattgctgcaaaaggtggctctacaaagtactgactttggggggggggggggggggtgaatagttatgcatgctcaagttctcATTTgttggtcttatttcttgtttgtttcacaataaaaaatatttttcatcttcaaagtggtaggcatgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU148197 True 1438 TUCP 0.40 2 28250842 28547915

Neighbor

gene id symbol gene type direction distance location
ddr1 LOC106605397 coding upstream 76 28194562 ~ 28250766 (+)
LOC110485672 LOC106605394 coding upstream 70637 28171846 ~ 28180205 (+)
LOC110485682 LOC106605395 coding upstream 79519 28165160 ~ 28171323 (+)
LOC110534576 dpys coding upstream 340856 27907789 ~ 27909986 (+)
LOC110485628 LOC106605483 coding upstream 572828 27651611 ~ 27678014 (+)
LOC110485894 LOC106605414 coding downstream 172021 28719936 ~ 28780547 (+)
LOC110485935 LOC106605415 coding downstream 235659 28783574 ~ 28865311 (+)
LOC110485968 LOC106605416 coding downstream 319387 28867302 ~ 28905546 (+)
LOC110485980 LOC106605417 coding downstream 366906 28914821 ~ 28931101 (+)
LOC110485990 LOC106579931 coding downstream 384073 28931988 ~ 28951235 (+)
G128474 NA non-coding upstream 69841 28180682 ~ 28181001 (+)
G128459 NA non-coding upstream 109937 28140278 ~ 28140905 (+)
G128438 NA non-coding upstream 157844 28092418 ~ 28092998 (+)
G128679 NA non-coding downstream 20401 28568316 ~ 28600609 (+)
G128652 NA non-coding downstream 51372 28599287 ~ 28644026 (+)
G128719 NA non-coding downstream 85681 28633596 ~ 28634986 (+)
G128640 NA non-coding downstream 140338 28688253 ~ 28689570 (+)
G128741 LOC106584099 non-coding downstream 142180 28690095 ~ 28690399 (+)
G128436 NA other upstream 161397 28088647 ~ 28089445 (+)
G128185 NA other upstream 533679 27716482 ~ 27717163 (+)
LOC110485466 LOC106605529 other upstream 947287 27288172 ~ 27303644 (+)
G127644 LOC106605534 other upstream 1060249 27189991 ~ 27190593 (+)
LOC110485212 LOC106605536 other upstream 1090197 27147880 ~ 27175747 (+)
G128853 LOC106605419 other downstream 391984 28939899 ~ 28981288 (+)
LOC110534631 LOC106580029 other downstream 929702 29424822 ~ 29478401 (+)
G129155 NA other downstream 936718 29484633 ~ 29485130 (+)
G130308 NA other downstream 1052111 29600026 ~ 29641096 (+)

Expression


Co-expression Network