G128546


Basic Information

Item Value
gene id G128546
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 28304484 ~ 28304997 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU148261
tccagagtagTGTGTGTTTCCAGAGTAGTGTGTGTTtccagagtagtgtgTGTGTGtccagagtagtgtgtgtgtccagagtagTGTGTTTGTccagatcagtgtgtgtgtgtccagaacagtgtgtgtgtccagagtagtgtgtgtccagaacagtgtgtgtgtccagatcagtgtgtgtgtgtccagatcagtgtgtgtgtgtgtccagattagtgtgtgtgtccagataagtgtgtgtgtgtccagagtagtgtgtgtgtccagataagtgtgtgtgtgtccagataagtgtgtgtgtgtccagagtagtgtgtgtgtgtccagttcaGTGTGTGTCTCCAGagtag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU148261 True 350 lncRNA 0.48 2 28304484 28304997

Neighbor

gene id symbol gene type direction distance location
LOC110485723 LOC106605400 coding upstream 7744 28281112 ~ 28296740 (+)
LOC110485735 LOC106605407 coding upstream 24204 28270251 ~ 28280280 (+)
ddr1 LOC106605397 coding upstream 53718 28194562 ~ 28250766 (+)
LOC110485672 LOC106605394 coding upstream 124279 28171846 ~ 28180205 (+)
LOC110485682 LOC106605395 coding upstream 133161 28165160 ~ 28171323 (+)
ino80e ino80e coding downstream 26736 28331733 ~ 28334614 (+)
LOC110485753 LOC106605405 coding downstream 30513 28335510 ~ 28338650 (+)
vars1 LOC106605401 coding downstream 33842 28338839 ~ 28356242 (+)
si:ch73-22o12.1 LOC106605406 coding downstream 94618 28399615 ~ 28469748 (+)
LOC110485836 LOC106605411 coding downstream 232536 28537533 ~ 28687330 (+)
G128531 NA non-coding upstream 39030 28264194 ~ 28265454 (+)
G128474 NA non-coding upstream 123483 28180682 ~ 28181001 (+)
G128459 NA non-coding upstream 163579 28140278 ~ 28140905 (+)
G128549 NA non-coding downstream 6829 28311826 ~ 28382924 (+)
G128561 NA non-coding downstream 74785 28379782 ~ 28380102 (+)
G128679 NA non-coding downstream 263319 28568316 ~ 28600609 (+)
G128652 NA non-coding downstream 294290 28599287 ~ 28644026 (+)
G128719 NA non-coding downstream 328599 28633596 ~ 28634986 (+)
G128436 NA other upstream 215039 28088647 ~ 28089445 (+)
G128185 NA other upstream 587321 27716482 ~ 27717163 (+)
LOC110485466 LOC106605529 other upstream 1000929 27288172 ~ 27303644 (+)
G127644 LOC106605534 other upstream 1113891 27189991 ~ 27190593 (+)
LOC110485212 LOC106605536 other upstream 1143839 27147880 ~ 27175747 (+)
LOC110485990 LOC106579931 other downstream 627059 28931988 ~ 28951235 (+)
G128853 LOC106605419 other downstream 634902 28939899 ~ 28981288 (+)
LOC110534631 LOC106580029 other downstream 1172620 29424822 ~ 29478401 (+)
G129155 NA other downstream 1179636 29484633 ~ 29485130 (+)
G130308 NA other downstream 1295029 29600026 ~ 29641096 (+)

Expression


Co-expression Network