G129582


Basic Information

Item Value
gene id G129582
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 28310319 ~ 28310732 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU149362
CGTTAACTGTCCCCCGTCCAGGATCTGTCTGGTTTTTAAGTCGTAGTCAGGCGTGTAGAACAGACGCACCATGGAGGCATTCAGAATCAGGTTGATCTTCAGGGTGCCAGCGTACGGCAGCTTCACAAAGTTCTGGTGTTctgggagacagagggacagagagagagacagagacagagacagagggagagagagacagagacagagagagagagacagagggagagagcgacagagacagagagagagggagagagagacagagacagagacagagagagacagagacagagagagacagagacagagggagagagagg
>TU149363
CGTTAACTGTCCCCCGTCCAGGATCTGTCTGGTTTTTAAGTCGTAGTCAGGCGTGTAGAACAGACGCACCATGGAGGCATTCAGAATCAGGTTGATCTTCAGGGTGCCAGCGTACGGCAGCTTCACAAAGTTCTGGTGTTctgggagacagagggacagagagagagacagagacagagggagagagagacagagacagagggagacagagacagagggagagagagg

Function

NR:

description
uncharacterized protein LOC110485743

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU149362 False 320 TUCP 0.53 2 28310319 28310732
TU149363 True 228 lncRNA 0.54 2 28310319 28310732

Neighbor

gene id symbol gene type direction distance location
LOC110485712 LOC106605398 coding downstream 44853 28252625 ~ 28265466 (-)
LOC110485705 LOC106605396 coding downstream 145464 28152489 ~ 28164855 (-)
LOC110485663 LOC106579570 coding downstream 160344 27933389 ~ 28149986 (-)
LOC110534585 LOC106605382 coding downstream 380503 27927664 ~ 27931710 (-)
LOC110485644 LOC106579058 coding downstream 485206 27678308 ~ 27825113 (-)
LOC110485793 LOC106605408 coding upstream 7313 28318045 ~ 28329196 (-)
LOC110485762 LOC106605404 coding upstream 45667 28356399 ~ 28373544 (-)
g6f-like-a g6f-like-a coding upstream 67086 28377818 ~ 28401529 (-)
LOC110485830 LOC106605406 coding upstream 158977 28468401 ~ 28471494 (-)
LOC110534614 LOC106605399 coding upstream 165091 28475823 ~ 28533709 (-)
G129572 LOC106605400 non-coding downstream 19068 28290531 ~ 28291251 (-)
G129547 NA non-coding downstream 77921 28230607 ~ 28232398 (-)
G129507 NA non-coding downstream 118776 28191336 ~ 28191543 (-)
G129459 LOC106605395 non-coding downstream 139002 28170013 ~ 28171317 (-)
G129464 znf384l non-coding downstream 141925 28167944 ~ 28168394 (-)
G129588 ino80e non-coding upstream 20963 28331695 ~ 28334476 (-)
G129631 LOC106605406 non-coding upstream 125234 28435966 ~ 28450726 (-)
G129773 LOC106579830 non-coding upstream 365293 28676025 ~ 28677493 (-)
G129250 NA other downstream 543787 27766157 ~ 27766532 (-)
LOC110485245 ubr5 other downstream 1032195 27231538 ~ 27278158 (-)
LOC110539285 LOC106579350 other downstream 1647305 26641958 ~ 26675649 (-)
G127083 NA other downstream 1748192 26561614 ~ 26562127 (-)
LOC110486376 LOC106605451 other upstream 1558314 29859575 ~ 29878744 (-)
c2h8orf37 cssa05h8orf37 other upstream 2578961 30889693 ~ 30896340 (-)
trnae-cuc LOC106605367 other upstream 2586294 30897026 ~ 30899564 (-)
LOC110486852 LOC106605360 other upstream 2881687 31192419 ~ 31196292 (-)

Expression


Co-expression Network