G128549


Basic Information

Item Value
gene id G128549
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 28311826 ~ 28382924 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU148264
ctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccatcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcctcccatcaattttaaccatcttccctgtccctgctgaagaaaagcaggcccaaaccatgatgctgccaccaccatgtttgacagtggggatggtgtgttca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU148264 True 259 lncRNA 0.37 2 28311826 28382924

Neighbor

gene id symbol gene type direction distance location
LOC110485723 LOC106605400 coding upstream 15086 28281112 ~ 28296740 (+)
LOC110485735 LOC106605407 coding upstream 31546 28270251 ~ 28280280 (+)
ddr1 LOC106605397 coding upstream 61060 28194562 ~ 28250766 (+)
LOC110485672 LOC106605394 coding upstream 131621 28171846 ~ 28180205 (+)
LOC110485682 LOC106605395 coding upstream 140503 28165160 ~ 28171323 (+)
si:ch73-22o12.1 LOC106605406 coding downstream 16691 28399615 ~ 28469748 (+)
LOC110485836 LOC106605411 coding downstream 154609 28537533 ~ 28687330 (+)
LOC110485894 LOC106605414 coding downstream 337012 28719936 ~ 28780547 (+)
LOC110485935 LOC106605415 coding downstream 400650 28783574 ~ 28865311 (+)
LOC110485968 LOC106605416 coding downstream 484378 28867302 ~ 28905546 (+)
G128546 NA non-coding upstream 6829 28304484 ~ 28304997 (+)
G128531 NA non-coding upstream 46372 28264194 ~ 28265454 (+)
G128474 NA non-coding upstream 130825 28180682 ~ 28181001 (+)
G128679 NA non-coding downstream 185392 28568316 ~ 28600609 (+)
G128652 NA non-coding downstream 216363 28599287 ~ 28644026 (+)
G128719 NA non-coding downstream 250672 28633596 ~ 28634986 (+)
G128640 NA non-coding downstream 305329 28688253 ~ 28689570 (+)
G128741 LOC106584099 non-coding downstream 307171 28690095 ~ 28690399 (+)
G128436 NA other upstream 222381 28088647 ~ 28089445 (+)
G128185 NA other upstream 594663 27716482 ~ 27717163 (+)
LOC110485466 LOC106605529 other upstream 1008271 27288172 ~ 27303644 (+)
G127644 LOC106605534 other upstream 1121233 27189991 ~ 27190593 (+)
LOC110485212 LOC106605536 other upstream 1151181 27147880 ~ 27175747 (+)
LOC110485990 LOC106579931 other downstream 549132 28931988 ~ 28951235 (+)
G128853 LOC106605419 other downstream 556975 28939899 ~ 28981288 (+)
LOC110534631 LOC106580029 other downstream 1094693 29424822 ~ 29478401 (+)
G129155 NA other downstream 1101709 29484633 ~ 29485130 (+)
G130308 NA other downstream 1217102 29600026 ~ 29641096 (+)

Expression


Co-expression Network