G128652


Basic Information

Item Value
gene id G128652
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 28599287 ~ 28644026 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU148373
gtaacaacacAACAGTAGTGTTACCACAGCTAGAATTACATGCCCTACATTTTAACACTGGCTTATTGTAGTGCAGTGTCTTTCTTGTCCTCAGTCTCTCCAAACTGTCTCCTCTCATTTAGTCAGTGCTGATTGATGGACCGCATGTGTGCCTGCAGAGCACACTGAAGTATATCTCAATTGGAGACTGTTTGCTCCCCCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU148373 True 203 lncRNA 0.46 2 28599287 28644026

Neighbor

gene id symbol gene type direction distance location
si:ch73-22o12.1 LOC106605406 coding upstream 129539 28399615 ~ 28469748 (+)
vars1 LOC106605401 coding upstream 243045 28338839 ~ 28356242 (+)
LOC110485753 LOC106605405 coding upstream 260637 28335510 ~ 28338650 (+)
ino80e ino80e coding upstream 264673 28331733 ~ 28334614 (+)
si:dkeyp-77h1.4 LOC106579702 coding upstream 280470 28297202 ~ 28318817 (+)
LOC110485894 LOC106605414 coding downstream 75910 28719936 ~ 28780547 (+)
LOC110485935 LOC106605415 coding downstream 139548 28783574 ~ 28865311 (+)
LOC110485968 LOC106605416 coding downstream 223276 28867302 ~ 28905546 (+)
LOC110485980 LOC106605417 coding downstream 270795 28914821 ~ 28931101 (+)
LOC110485990 LOC106579931 coding downstream 287962 28931988 ~ 28951235 (+)
G128549 NA non-coding upstream 216363 28311826 ~ 28382924 (+)
G128561 NA non-coding upstream 219185 28379782 ~ 28380102 (+)
G128546 NA non-coding upstream 294290 28304484 ~ 28304997 (+)
G128531 NA non-coding upstream 333833 28264194 ~ 28265454 (+)
ddr1 LOC106605397 non-coding upstream 348526 28194562 ~ 28250766 (+)
G128640 NA non-coding downstream 44227 28688253 ~ 28689570 (+)
G128741 LOC106584099 non-coding downstream 46069 28690095 ~ 28690399 (+)
G128745 NA non-coding downstream 48926 28692952 ~ 28693246 (+)
G128746 NA non-coding downstream 49320 28693346 ~ 28693605 (+)
G128747 NA non-coding downstream 49666 28693692 ~ 28693967 (+)
G128490 NA other upstream 51372 28250842 ~ 28547915 (+)
G128436 NA other upstream 509842 28088647 ~ 28089445 (+)
G128185 NA other upstream 882124 27716482 ~ 27717163 (+)
LOC110485466 LOC106605529 other upstream 1295732 27288172 ~ 27303644 (+)
G127644 LOC106605534 other upstream 1408694 27189991 ~ 27190593 (+)
G128853 LOC106605419 other downstream 295873 28939899 ~ 28981288 (+)
LOC110534631 LOC106580029 other downstream 833591 29424822 ~ 29478401 (+)
G129155 NA other downstream 840607 29484633 ~ 29485130 (+)
G130308 NA other downstream 956000 29600026 ~ 29641096 (+)

Expression


Co-expression Network