Gene
RNA
| Item | Value |
|---|---|
| gene id | G129784 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 28695765 ~ 28696001 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Retrovirus-related Pol polyprotein LINE-1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU149594 | True | 237 | lncRNA | 0.41 | 1 | 28695765 | 28696001 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110534614 | LOC106605399 | coding | downstream | 162056 | 28475823 ~ 28533709 (-) |
| LOC110485830 | LOC106605406 | coding | downstream | 224271 | 28468401 ~ 28471494 (-) |
| g6f-like-a | g6f-like-a | coding | downstream | 294236 | 28377818 ~ 28401529 (-) |
| LOC110485762 | LOC106605404 | coding | downstream | 322221 | 28356399 ~ 28373544 (-) |
| LOC110485793 | LOC106605408 | coding | downstream | 366569 | 28318045 ~ 28329196 (-) |
| LOC110485869 | LOC106605412 | coding | upstream | 7682 | 28703683 ~ 28706157 (-) |
| LOC110485879 | LOC106605413 | coding | upstream | 10862 | 28706863 ~ 28714039 (-) |
| LOC110485888 | LOC106579893 | coding | upstream | 19391 | 28715392 ~ 28718511 (-) |
| LOC110485998 | LOC106605419 | coding | upstream | 281828 | 28977829 ~ 29007911 (-) |
| trnat-ugu-28 | NA | coding | upstream | 315719 | 29011720 ~ 29011792 (-) |
| G129778 | NA | non-coding | downstream | 5686 | 28689778 ~ 28690079 (-) |
| G129777 | NA | non-coding | downstream | 6115 | 28689184 ~ 28689650 (-) |
| G129776 | LOC106579830 | non-coding | downstream | 8155 | 28684374 ~ 28687610 (-) |
| G129773 | LOC106579830 | non-coding | downstream | 18272 | 28676025 ~ 28677493 (-) |
| G129799 | NA | non-coding | upstream | 25206 | 28721207 ~ 28721896 (-) |
| G129894 | LOC106605415 | non-coding | upstream | 159180 | 28855181 ~ 28860491 (-) |
| G129896 | NA | non-coding | upstream | 164833 | 28860834 ~ 28865634 (-) |
| G129904 | LOC106605416 | non-coding | upstream | 177491 | 28873492 ~ 28875218 (-) |
| G129907 | NA | non-coding | upstream | 181389 | 28877390 ~ 28888656 (-) |
| G129582 | NA | other | downstream | 385033 | 28310319 ~ 28310732 (-) |
| LOC110485663 | LOC106579570 | other | downstream | 545779 | 27933389 ~ 28149986 (-) |
| G129250 | NA | other | downstream | 929233 | 27766157 ~ 27766532 (-) |
| LOC110485245 | ubr5 | other | downstream | 1417641 | 27231538 ~ 27278158 (-) |
| LOC110486376 | LOC106605451 | other | upstream | 1173045 | 29859575 ~ 29878744 (-) |
| c2h8orf37 | cssa05h8orf37 | other | upstream | 2193692 | 30889693 ~ 30896340 (-) |
| trnae-cuc | LOC106605367 | other | upstream | 2201025 | 30897026 ~ 30899564 (-) |
| LOC110486852 | LOC106605360 | other | upstream | 2496418 | 31192419 ~ 31196292 (-) |
| LOC110486868 | LOC106605361 | other | upstream | 2501072 | 31196917 ~ 31199241 (-) |
