G128813


Basic Information

Item Value
gene id G128813
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 28851577 ~ 28851809 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU148539
cttgttgttgattcttcacaaaaaaatacagttttatatctttatgtttgaagcctgaaatgtggcaaaaagtcgcaaagttcaagggggccgaatactttcgcaaggcactgtatcttcatTACAGCAGATGGGTAAAATGAGAGTACTGTATTTCTGGGAATGTTTAGGCCTAAACACTGAAATATAGGCTACCCAATATGTACGCACAACATAAAGGGTAACAATTATAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU148539 True 233 lncRNA 0.36 1 28851577 28851809

Neighbor

gene id symbol gene type direction distance location
LOC110485894 LOC106605414 coding upstream 71030 28719936 ~ 28780547 (+)
LOC110485836 LOC106605411 coding upstream 164247 28537533 ~ 28687330 (+)
si:ch73-22o12.1 LOC106605406 coding upstream 381829 28399615 ~ 28469748 (+)
vars1 LOC106605401 coding upstream 495335 28338839 ~ 28356242 (+)
LOC110485753 LOC106605405 coding upstream 512927 28335510 ~ 28338650 (+)
LOC110485968 LOC106605416 coding downstream 15493 28867302 ~ 28905546 (+)
LOC110485980 LOC106605417 coding downstream 63012 28914821 ~ 28931101 (+)
LOC110485990 LOC106579931 coding downstream 80179 28931988 ~ 28951235 (+)
trnat-ugu-29 NA coding downstream 169610 29021419 ~ 29021491 (+)
LOC110486009 LOC106605422 coding downstream 187119 29038928 ~ 29054543 (+)
G128638 NA non-coding upstream 77995 28768219 ~ 28773582 (+)
G128760 LOC106579893 non-coding upstream 132842 28712992 ~ 28718735 (+)
G128747 NA non-coding upstream 157610 28693692 ~ 28693967 (+)
G128746 NA non-coding upstream 157972 28693346 ~ 28693605 (+)
G128745 NA non-coding upstream 158331 28692952 ~ 28693246 (+)
LOC110485935 LOC106605415 non-coding downstream 12487 28783574 ~ 28865311 (+)
G129093 NA non-coding downstream 503663 29355472 ~ 29356526 (+)
G129099 NA non-coding downstream 515165 29366974 ~ 29367331 (+)
G129149 NA non-coding downstream 621473 29473282 ~ 29473490 (+)
G129151 NA non-coding downstream 622444 29474253 ~ 29474520 (+)
G128490 NA other upstream 303662 28250842 ~ 28547915 (+)
G128436 NA other upstream 762132 28088647 ~ 28089445 (+)
G128185 NA other upstream 1134414 27716482 ~ 27717163 (+)
LOC110485466 LOC106605529 other upstream 1548022 27288172 ~ 27303644 (+)
G127644 LOC106605534 other upstream 1660984 27189991 ~ 27190593 (+)
G128853 LOC106605419 other downstream 88090 28939899 ~ 28981288 (+)
LOC110534631 LOC106580029 other downstream 625808 29424822 ~ 29478401 (+)
G129155 NA other downstream 632824 29484633 ~ 29485130 (+)
G130308 NA other downstream 748217 29600026 ~ 29641096 (+)

Expression


Co-expression Network