G128853 (LOC106605419)


Basic Information

Item Value
gene id G128853
gene name LOC106605419
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 28939899 ~ 28981288 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU148590
ggattggacagctgaggactggggtaaagtcattttctcctttccgattgtttggggcatccggaaaaaagcttgtccggagaagacaaggtgagcgctaccatcagtcctgtcaACAGTAAAGCATTCTAAGACCAtacatgtgtggggttgcttctcagccaagggagtgggctcactcacaattttataaataaagaatggtaccaacacatcctcagagagcaacttctcccaaccatccaggaacagtatggtaacaaacaatgccttttccagcatgttggagcaccttgccataaagcaaaagtgataactaagtgcctcagggaacaaaacatcgatattttgggtccatggccaggaaactccccagaccttaatcccattgagaacttgtggtcaatcctcaagaggcgggtagacaaacaaaaacccacaaattcggACAAACTCCAagtattgattatgcaagaatgggctgacatcagtcaggatgtggcccagaagttaattgacaacaTGCCagagcggattgcagaggtcttgaaaaagaagggtcaacactgcaaatattgactctttgcatcaacttcaagtaattgtcaataaaagccttcgacactcatgaaatgcttgtaattatacttcagtattccatagtaacatctgacagaaatatctaaagacactgaagcagcaaactttgtgtaaattaatatttgtgtcattctcacaacagtgaatgttcctgagtagccgagttacagttttgacttaaatctgcttgaaaatctatggcaagacctgaaaatattttgctagcaatgatcaacaaccaatttgacagagcttgaagaattttgaaaagaataaggggcaaatgttgcacaatccaggtgtgaaaagctgttagagacttgcccagaaagactcccagctgtaatcgctggcaaaggtgattctaacatgtgttgactaagtgggttgaatacttacgtaaTAAAGATATACCATTTACAAATGTTAGTATTTTTCTTCCACTTGACATTACAGATTATTTGTAGAGGAATTTAATTGTACATTTTTTCaaccattttaatcccactttgtaacaacaaaatgtggaaaaagtcaaagggtgttaatactttctgaaggcaatgtatatACGCTTAGTAGGACAGGAGGGCTGTAGCAAGACCTGATCCTAcatcagcactcttactctggGGGCTTGGTACATACTGGGAAGCTAGTCATTACTTTAGTTTTGCACACCTCAAGGCAATGAAAAGTAACACTATCATATAGACTTGGGCTCAGTCCCAAAATCAGCACTATTTTTAGGCTCTGGTCACCTTTATcggtcttggtcaaaagtagtacactataaagggaagagggtgccatttgggatacaaaccCTGCATCACGGATGGTTAGCAGCACTGATGAGCCGTAGAATGGGTTACTCGTCCAGCTTGATTTGGGGTAGAGCAGTCATTACCACCCTTTCAAATTAAAAGCATAACAGGCTAATTATAGTCAAGTTTATGCATGCATATAACCTGCGCAAAATGTAAATGATCACAATCAGAAATGGTACCCATTAATAGTAAGTAAGGAATTCTGATCATTTTCTGCAAATGTGTAGACTGAATAACAAAAAATAGGACAATTGAACTCAGAATTGCTGTAATGGGGACACTGAAGTGATATGAACCTTTTTGTATTTATCATTTGACACACAGGGCAATGGCAAAGAAACTGATTGAAGAAACTCCAGTTTTTCTGAAAGAAATAGAACTACCCCTTGCATATCTAGTGACCGCACAGCAACAGAACCTTTGACATAAATACATGATAATAGATTCTCTTAATTTTCATTTAGAGGAACCCTGTTCTTAAAAGACTACTACATTTGAATGAATAATGCATGTTTTAGTCAGCATCTTTAGAAAACTGGCAACATATTTTCCTGGACACACTCTTTGAAAGTTTTATCTGCCTTGAATTAATATCTCAAATAATCTAGAAGGGGAATAATTTATTATCCATGGGCCACAATAGTTCAAAACAGTTAATGGCAAATATTAAAGCCTCAATGAAGCACAAGATAATCCAAATCACAACTAATAACACATACTTAATGGTACTATAGACTGGTGACCATATTTTCAAATTCACTTTGGTTTCTCTCAAAGgaatacttcgggattttggcaatgaagccctttatctacttcctcagggtcagatgaactcatagataccctttttatgtctctgtgtgtggtttgaaggaagttgctagcGCTACtagtgttagcacaatgactggaagtgtaTGGGTATCTGCagcctgggcaactccagtcctcgggggcctgattggtgtcacacttttgccccagctaacacacctgactccaatagtCAACTAATCATGAGCTTCAGTTAAAAAAACTATTAGTTTAAATCAGATGTGTTTGCTAGGGATCGggggaaaagtgtgacaccaatcaggtcTCAGAGGACTGGAATTTCCCAGGCCTGAAGCAGATACCCAGCTAGCAGAtatccatagacttccagtcattgtgctaatgctagttaggattggctcgcgaaactacttctaacttccttcatactgcacGCAGAGGCATAAATATGGTACCCACGAGTTCAtttgactctgggtaagtagacaATTGCCAGAATCTCacagtatccctttaaggttTTGGCAACATTCTGCAATTATGTAAATTGCCAATTAGAAAGGCAACATGACAAAGCTACAACTTTGTGCAGGAGGGTAGGCTAAGCCACAAAGGTGTGATTTATCAGATAACTGTATAACAAATCACAAACCAATCAAGTATGAAACCAAGACCAAGTCATCCTAAAGTCCCACCTGGGCTTTGCTGAAAACCTACATTACACACTCAAATAAGTACAGGTATAGATAGATAGGTTCAGTGTTTAAGACTAATAAAAAAACATACATGAATTTATACTATACATTTTTGCTCATAAATAAGTATATTAAAGAAATTCCTATATCTCAAAAATACATGTTGTGTAGCACTTTCTGCAGGTACAGACAATGCATCCTTAAATCGTGACTCATGTATTCCCTCGTCCCATGCTAAATGCCATTGAATTTCTACTGCATTTCACGCTCTGTGTGAGGACATGGTTGTCTCATCAAACAGCACAGTCTCTCATCCTAGATACAGATTACATCATATCAACTATCCTCAAATCGGAGACAATCCTCAATCACAGAAGTTCCTTTTAAAAAGAGATTGAACGAGATCTTAAGCacttgcaaattcataacatattgcaGGAAACATACATTTATCGTGCAGGACGTAACATGTCATACAAAATGAATGACGTCGTATACAATTGTGCACCATTTTCTGGGACCCATTTTGTCTCGTGAGcgctactttcaaaactactggctgaaattatacagaACCTTtcttgcatcaccttcaataatcCAAAGCCCCAACATCTGATCATCTGTAAATATCAACTCAAATTATGTCCTGCACGTGAGTACATCTGCAAAGGGCCCCAGGAGGTTTTTGTTAAAGATGCAGCGCACCCACACCAGGTACGTCGTAAATGGTTTGATGTTTTCAGAGAAGGTATAGTTCTGGTGGGGGAGAATATAAGGCATGTACGTGTTCTCTCCTTGCTCCTGGATCCACACTTCGTACTTCACTTCCCTGACCTTCAGGTACTTCAGGTTCCAGGGGATTTGCCACGACACAGTCAGCATGGCCTCGTTGGTGGCCTGGACCGATGTCTGGCACTGGGGCTCTCTGACCTGGCCTGGGTGGACCGTGCTGGCAGGCTTGGCCTTCTTCAGATTGGGCCTGGTTTTCACTGTCGCTCTGAGAGCCTCTAGTAAAGAAGGGATGTCCACTATGGTGTCCTGGTAGATGcgatagagccactctgggttGCGGCAACACAGGTGTCTGGGCACTTCCTTACTGGCCAGGATGTGTTCCTGGTCTTCCTTATCCAGGTGGGCTATACCTCCCTGCTCCCAGGGCCTCTCTGGGTAGGCCACAGAGTTCTCCTCCACCATGTTCCTCCAGGCCACATACTGCAGGTCCATGCCTGGTAGAGAGGCTAGGGTTTTGTAAGGGGTGTACTGCTCTGGGTTGACCGCATAGGGGAAGAGCTCTACTACGACGGCCCCccgggagaggaagagagaggagaccagcTGGGCCCCGTGCATGCTGACCAATATGGAGGCCCCGCTGATGACCTTGATGATACTGGGGAAGGTCTGCTCCTCCAGAGACACTGTCACCGCTCTCATCTGGAACTCCTGCGCTAACGCCAGGATCAGCTCCGCTTCATTCAGGATGAGTCTGTTGATGGAGCGACTGAACACTACGATGTACTCGTCCTTTTCCTCCGCtgcgctctcctctcctcctcgcgTGGTGATATTGAGCTTCTCCATCAGCGATGAGGAAAACTGCCGGATCTCGTTCCCAGAGACCAGGATGTTGGCTTTGGGGCCCTGTGGCTGGACAAAGCCGTACTGGTACCATGTGGTCATCTTGGACAAGCCCACATAGGACTTTGTGAAGCACATAAGTTTGCCAAAGTTCTTCAGCTGTTCTTTGAGAAGTGGCTGCTTGCTGCTCAGCAGGCGGTAGAGGTCAAAGTGTGCGCCCTCACCCCAGCCCTCCATGAAGACCAGGCGGGCCTCATCATCCAGGTCCGAGTACTGCTGCATGGTGTAGAAGATGGGCAGCAGGTCATCGTGGAAGACATGCATCAGATTATCTGGATTGAACCGGTTGAGGATGAGGGTGACGTCAGGGATGAACACAGGCTTGGGCATGAACTTGAGGGCAGCTGCGGGCAGCTCCAGGAAGTTGAAGTACTGGGTGTTGTGATCCTCCACAGAGGACAGGTCCAG

Function

NR:

description
protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU148590 True 4975 TUCP 0.44 2 28939899 28981288

Neighbor

gene id symbol gene type direction distance location
LOC110485980 LOC106605417 coding upstream 8798 28914821 ~ 28931101 (+)
LOC110485968 LOC106605416 coding upstream 34353 28867302 ~ 28905546 (+)
LOC110485935 LOC106605415 coding upstream 74588 28783574 ~ 28865311 (+)
LOC110485894 LOC106605414 coding upstream 159352 28719936 ~ 28780547 (+)
LOC110485836 LOC106605411 coding upstream 252569 28537533 ~ 28687330 (+)
trnat-ugu-29 NA coding downstream 40131 29021419 ~ 29021491 (+)
LOC110486009 LOC106605422 coding downstream 57640 29038928 ~ 29054543 (+)
LOC110486020 LOC106605423 coding downstream 79300 29060588 ~ 29081536 (+)
LOC110486049 stea4 coding downstream 169589 29150877 ~ 29161809 (+)
LOC110486065 NA coding downstream 183510 29164798 ~ 29171119 (+)
G128813 NA non-coding upstream 88090 28851577 ~ 28851809 (+)
G128638 NA non-coding upstream 166317 28768219 ~ 28773582 (+)
G128760 LOC106579893 non-coding upstream 221164 28712992 ~ 28718735 (+)
G128747 NA non-coding upstream 245932 28693692 ~ 28693967 (+)
G129093 NA non-coding downstream 374184 29355472 ~ 29356526 (+)
G129099 NA non-coding downstream 385686 29366974 ~ 29367331 (+)
G129149 NA non-coding downstream 491994 29473282 ~ 29473490 (+)
G129151 NA non-coding downstream 492965 29474253 ~ 29474520 (+)
G129153 NA non-coding downstream 494484 29475772 ~ 29475990 (+)
G128490 NA other upstream 391984 28250842 ~ 28547915 (+)
G128436 NA other upstream 850454 28088647 ~ 28089445 (+)
G128185 NA other upstream 1222736 27716482 ~ 27717163 (+)
LOC110485466 LOC106605529 other upstream 1636344 27288172 ~ 27303644 (+)
G127644 LOC106605534 other upstream 1749306 27189991 ~ 27190593 (+)
LOC110534631 LOC106580029 other downstream 496329 29424822 ~ 29478401 (+)
G129155 NA other downstream 503345 29484633 ~ 29485130 (+)
G130308 NA other downstream 618738 29600026 ~ 29641096 (+)
LOC110486279 LOC106605442 other downstream 704679 29685855 ~ 29697686 (+)
G130414 NA other downstream 808288 29789576 ~ 29789831 (+)

Expression


Co-expression Network