G129093


Basic Information

Item Value
gene id G129093
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 29355472 ~ 29356526 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU148849
AAACACTTCTAACATGATGTGTCATTTACGTCGCCATCACTCGGCCCTATCCCTACTAGCAAGTGGAGCTGGAGCAAGGAGCGTCCACTCGTTAGCGAAACACAACAATCCCTCGCTGCTGCCTTCCAAAAACAATTTGcgacaaatttaaaaaaaacacaaagaaataaagaaagcAGTGGGATTATTCATAGCCAAAGATTTGCAGCCCTATTCGGTGGTTACTGACTCTGGATTTCGTCACCTGATTAAATGTTTTTTACCACGTTACAATGTCCCCTCCCACACACATTTCAGCAGCGAAGTAATTCCCAAACTCTATGAAACATCACGGAGAGAAATTGAAAACGAATTGACACAGACACCCTATCTAGCTCTCGCCACTGATAGTTGGACCTCCAGAGCAACTcaaagctacctcactgtgacggttcactgtgtactggaagctacctcactgtggcggttcactgtgtactggaagctacctcactgtgacggtttactatgtactggaagctacctcactgtgacggtttactatgtactggaagctacctcactgtgacggtttactatgtactggaagctacctcactgtgacggtttactatgtactggaagctacctcactgtgacggttcactatgtactggaagctacctcactgtgacggtttactatgtactggaagctacctcactgtgacggtttactatgtactggaagctacctcactgtgacggtttactatgtactggaagctacctcactg

Function

NR:

description
zinc finger BED domain-containing protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU148849 True 775 lncRNA 0.45 2 29355472 29356526

Neighbor

gene id symbol gene type direction distance location
LOC118937130 NA coding upstream 122751 29231578 ~ 29232721 (+)
LOC100136336 stea4 coding upstream 158832 29172098 ~ 29196640 (+)
LOC110486065 NA coding upstream 184353 29164798 ~ 29171119 (+)
LOC110486049 stea4 coding upstream 193663 29150877 ~ 29161809 (+)
LOC110486020 LOC106605423 coding upstream 273936 29060588 ~ 29081536 (+)
LOC110486083 LOC106605428 coding downstream 13309 29369835 ~ 29418297 (+)
LOC110534631 LOC106580029 coding downstream 68296 29424822 ~ 29478401 (+)
LOC110486208 NA coding downstream 188718 29545045 ~ 29553946 (+)
LOC118944146 NA coding downstream 237638 29594164 ~ 29594216 (+)
LOC118936731 dcst2 coding downstream 298349 29654875 ~ 29662028 (+)
LOC110485935 LOC106605415 non-coding upstream 490297 28783574 ~ 28865311 (+)
G128813 NA non-coding upstream 503663 28851577 ~ 28851809 (+)
G128638 NA non-coding upstream 581890 28768219 ~ 28773582 (+)
G128760 LOC106579893 non-coding upstream 636737 28712992 ~ 28718735 (+)
G128747 NA non-coding upstream 661505 28693692 ~ 28693967 (+)
G129099 NA non-coding downstream 10448 29366974 ~ 29367331 (+)
G129149 NA non-coding downstream 116756 29473282 ~ 29473490 (+)
G129151 NA non-coding downstream 117727 29474253 ~ 29474520 (+)
G129153 NA non-coding downstream 119246 29475772 ~ 29475990 (+)
G129154 NA non-coding downstream 119555 29476081 ~ 29476358 (+)
G128853 LOC106605419 other upstream 374184 28939899 ~ 28981288 (+)
LOC110485990 LOC106579931 other upstream 411082 28931988 ~ 28951235 (+)
G128490 NA other upstream 807557 28250842 ~ 28547915 (+)
G128436 NA other upstream 1266027 28088647 ~ 28089445 (+)
G128185 NA other upstream 1638309 27716482 ~ 27717163 (+)
G129155 NA other downstream 128107 29484633 ~ 29485130 (+)
G130308 NA other downstream 243500 29600026 ~ 29641096 (+)
LOC110486279 LOC106605442 other downstream 329441 29685855 ~ 29697686 (+)
G130414 NA other downstream 433050 29789576 ~ 29789831 (+)

Expression


Co-expression Network