G129151


Basic Information

Item Value
gene id G129151
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 29474253 ~ 29474520 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU148908
GAAATTGGATTCCTCCCTGCCAGTTGCAATGTGGCTATCGGAAGTTAATAGTTGTATCCCTTTGGAGAAAATCACTTACTGCTTGAGGAATAAGTTAaagacattttacagaatttggcaaccttttattgactatatggagaatctccccccacatctcATTGATTGAATCTCTATATAACCCTTATATCATGTTTCACACGTAATGTATAGCATGTAGCTTATGATCCAATGgctcattatttttattttttattttagtcttTAT

Function

NR:

description
Sterile alpha motif domain-containing protein 3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU148908 True 268 lncRNA 0.49 1 29474253 29474520

Neighbor

gene id symbol gene type direction distance location
LOC110486083 LOC106605428 coding upstream 55956 29369835 ~ 29418297 (+)
LOC118937130 NA coding upstream 241532 29231578 ~ 29232721 (+)
LOC100136336 stea4 coding upstream 277613 29172098 ~ 29196640 (+)
LOC110486065 NA coding upstream 303134 29164798 ~ 29171119 (+)
LOC110486049 stea4 coding upstream 312444 29150877 ~ 29161809 (+)
LOC110486208 NA coding downstream 70724 29545045 ~ 29553946 (+)
LOC118944146 NA coding downstream 119644 29594164 ~ 29594216 (+)
LOC118936731 dcst2 coding downstream 180355 29654875 ~ 29662028 (+)
LOC110486269 LOC106580132 coding downstream 204687 29679207 ~ 29685150 (+)
LOC110486279 LOC106605442 coding downstream 211335 29685855 ~ 29697686 (+)
G129149 NA non-coding upstream 763 29473282 ~ 29473490 (+)
G129099 NA non-coding upstream 106922 29366974 ~ 29367331 (+)
G129093 NA non-coding upstream 117727 29355472 ~ 29356526 (+)
LOC110485935 LOC106605415 non-coding upstream 609078 28783574 ~ 28865311 (+)
G128813 NA non-coding upstream 622444 28851577 ~ 28851809 (+)
G129153 NA non-coding downstream 1252 29475772 ~ 29475990 (+)
G129154 NA non-coding downstream 1561 29476081 ~ 29476358 (+)
G129145 NA non-coding downstream 4192 29478712 ~ 29480636 (+)
G129146 NA non-coding downstream 6446 29480966 ~ 29482856 (+)
G129156 NA non-coding downstream 11246 29485766 ~ 29486092 (+)
G128853 LOC106605419 other upstream 492965 28939899 ~ 28981288 (+)
LOC110485990 LOC106579931 other upstream 529863 28931988 ~ 28951235 (+)
G128490 NA other upstream 926338 28250842 ~ 28547915 (+)
G128436 NA other upstream 1384808 28088647 ~ 28089445 (+)
G128185 NA other upstream 1757090 27716482 ~ 27717163 (+)
LOC110534631 LOC106580029 other downstream 3097 29424822 ~ 29478401 (+)
G129155 NA other downstream 10113 29484633 ~ 29485130 (+)
G130308 NA other downstream 125506 29600026 ~ 29641096 (+)
G130414 NA other downstream 315056 29789576 ~ 29789831 (+)

Expression


Co-expression Network