G129157


Basic Information

Item Value
gene id G129157
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 29486272 ~ 29486741 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU148914
ATGTGTTCCACAGCACTAAGCATCAAAACCCCATTTTATGTTGTATTTCAGTTCTTGGTATAAAGCAAGCATTTACCCGTCAAAGCTAGGCTACAACAATGTTGGTCACTTGGTCAATTGGGCATTTTGCAATTTGGACTCTTCTCCCTTTTCTGTTTGCCAGTGGAGAAGAACAAACAAGGGCCAAAGAAAGTGGGTAAAACAAAAAAGCGTATCTTCGTCAAGTCCAATTTAGTAACCAAAAGGATGGCATTATTGTATCTGATTTATGTGTGGAAAGATCTAAGTTTAAGGAAaggtgtaggcctacattccgGTAAAACCTTTGGCAGTACAAGGCATTCCTAAAGCATTGGTGCCATTGGAAGTGTGCCTTTGAAAGCGACATGGCATGGGCTAGATTGAACCATGTGTGCAGTGCGTTTGTGTgtggtcttctctctctctctctctgaaccaacACTAAAGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU148914 True 470 lncRNA 0.36 1 29486272 29486741

Neighbor

gene id symbol gene type direction distance location
LOC110534631 LOC106580029 coding upstream 7871 29424822 ~ 29478401 (+)
LOC110486083 LOC106605428 coding upstream 67975 29369835 ~ 29418297 (+)
LOC118937130 NA coding upstream 253551 29231578 ~ 29232721 (+)
LOC100136336 stea4 coding upstream 289632 29172098 ~ 29196640 (+)
LOC110486065 NA coding upstream 315153 29164798 ~ 29171119 (+)
LOC110486208 NA coding downstream 58503 29545045 ~ 29553946 (+)
LOC118944146 NA coding downstream 107423 29594164 ~ 29594216 (+)
LOC118936731 dcst2 coding downstream 168134 29654875 ~ 29662028 (+)
LOC110486269 LOC106580132 coding downstream 192466 29679207 ~ 29685150 (+)
LOC110486279 LOC106605442 coding downstream 199114 29685855 ~ 29697686 (+)
G129156 NA non-coding upstream 180 29485766 ~ 29486092 (+)
G129146 NA non-coding upstream 3416 29480966 ~ 29482856 (+)
G129145 NA non-coding upstream 5636 29478712 ~ 29480636 (+)
G129154 NA non-coding upstream 9914 29476081 ~ 29476358 (+)
G129153 NA non-coding upstream 10282 29475772 ~ 29475990 (+)
G129160 NA non-coding downstream 2212 29488953 ~ 29489241 (+)
G129165 NA non-coding downstream 9063 29495804 ~ 29497706 (+)
G129176 NA non-coding downstream 25095 29511836 ~ 29512133 (+)
G130265 NA non-coding downstream 34562 29521303 ~ 29522801 (+)
G129155 NA other upstream 1142 29484633 ~ 29485130 (+)
G128853 LOC106605419 other upstream 504984 28939899 ~ 28981288 (+)
LOC110485990 LOC106579931 other upstream 541882 28931988 ~ 28951235 (+)
G128490 NA other upstream 938357 28250842 ~ 28547915 (+)
G130308 NA other downstream 113285 29600026 ~ 29641096 (+)
G130414 NA other downstream 302835 29789576 ~ 29789831 (+)
G131491 NA other downstream 1213441 30700182 ~ 30700623 (+)
G131517 ccne2 other downstream 1261314 30748055 ~ 30749954 (+)

Expression


Co-expression Network