G129165


Basic Information

Item Value
gene id G129165
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 29495804 ~ 29497706 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU148923
CCTGACACTGGCTGGCTAGCTTCCATGTGGGGACCTTTGCCAACTCCACTAAGTcattctcttccctctgtccttgtGACTTCACTCTGAAAGTTCCCACATATTGGGATAGGAAGCAGTATTGCACAAACTCTGCATGGCCAGCAAGACCTAGGATGACAAATGCCTATCATATTGCACCTATTCACACCTGAGAGAGAGTTAGTCAGGATAGAGCAAAGAGAATGAATGATCAGATTGGAATCCAGCCACAGTAGTCAGGGGTCAATAGCAGGACATCTCAAGCTTAATAGAATAATGCTTAAAATACTCCATTCTAAATGGAATCCAAATAAATGTTCAAGTCTGTCCTCAGCAGGGTAACTCGTTTTGTTGTTATTACACAAGTAGAATGGGAAGAGGCTTTATTTCACTTATGTGGTAACAAAATGCTCAACTCCATTACAAAGTAAGTTACAATGTAACATGTTAAAATACAGTGTTATCATTGAGTtattacagtgttactacactGGCATAAGAATAACGTAATTAGGCTATGTGACACATAATATATGATATTAAATATATCAAGTTCTGTACAATGTATATGGATTTTTATGACTGGCTATTATGGTGGAGCAGAGAAGCAGACTGTTGAGACAGACTGGGCAGTTCAGTCAGTTGAGCCCTGGGGTCTGTCTGCTCCTGGGAGGTATGATGACAACCACAGCACTCAGCGGTTAGATAGAGTTAGCACAAGTGTCACCACATACATCACTGACTAGATGACCTTGGAACAGCAGTGCTCACTCACAGTTGCTCTTGATTTATTTGACCGTTTTTTTAAAAGTAGTATCGTTCATTAGCATTCTTGTTGTGTACAGAATCACAAAGGtcaaataaacatatttttaagAAATTCAATTGTTTATTCTTTTTTGAGGACAAACATTGTTTGGCTCTTTGTTTATGCTTCTGTTGAATTAATCAGTTAAAGATGACTTTATTCATAGAAACACTTCCAATAAGGCTTTATTTCATATTCAATTACTGGGCACAGAATCAGATGCCCAGGAAAGTATACACTAGAATCCACAGAGATCCACATTTATTCAAAATAGGGACATAATTCCACTATTAAAGGCTTAACGTAATATGGCTAAATAACTGCAAGTCTACAGTCTCTTGCTACAGATCTGTTTTTTGCTGCTGAGATGACATTATCTGATCATGACAGAGTTACCAGGAGTTTCATATCCAGAGGATGTACAGTATTTATCAAATTCCCATCATCCCTGTAACGTTAgcttatgttttttattttacagtTAGATATGAGATGGAAAAACACATCCTTTAACTGTTCGGTCTTAAAACACAAAATGGAATCCATGTATTCCTATAATAGCTgtaaatacaaaaacACTCAACGGTTAACCGCTGTCATTCACACAACCACCGTTCATACAGTGAAATTGAGGGCAAGAACAGCAACTCAAACCCAGAAGTAACACAGTCCTACATACATGAATTATCATGTATACTTTCTTCCAAAGTCTCTGGTACCTTTTTGCTTTTCCAGTCTGGTATAATAACAATGTTGTAAAATGGTTCTTCTTCCTCCTTTACCACAACTCTGAAACCCCTCCCCTTTCACTCAATGgcagacacagtcacacacatttgAACAGCAGTTGGAAGTCTGTACTGAGAGGcagtaagagtgtgtgtgtgaatgtgtgtgtgagagtgtgtagaTAGACAGTGCTGGACAGGTTACTCATCTACATGCCTCAGCACTCACACATCCTCGAATCATCTCACACCTTGATGTGCAGCAGGACCTGTTTGCGATATGGGTTGAAGTCGTCTGGAACAGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU148923 True 1863 lncRNA 0.54 2 29495804 29497706

Neighbor

gene id symbol gene type direction distance location
LOC110534631 LOC106580029 coding upstream 17403 29424822 ~ 29478401 (+)
LOC110486083 LOC106605428 coding upstream 77507 29369835 ~ 29418297 (+)
LOC118937130 NA coding upstream 263083 29231578 ~ 29232721 (+)
LOC100136336 stea4 coding upstream 299164 29172098 ~ 29196640 (+)
LOC110486065 NA coding upstream 324685 29164798 ~ 29171119 (+)
LOC110486208 NA coding downstream 47538 29545045 ~ 29553946 (+)
LOC118944146 NA coding downstream 96458 29594164 ~ 29594216 (+)
LOC118936731 dcst2 coding downstream 157169 29654875 ~ 29662028 (+)
LOC110486269 LOC106580132 coding downstream 181501 29679207 ~ 29685150 (+)
LOC110486279 LOC106605442 coding downstream 188149 29685855 ~ 29697686 (+)
G129160 NA non-coding upstream 6563 29488953 ~ 29489241 (+)
G129157 NA non-coding upstream 9063 29486272 ~ 29486741 (+)
G129156 NA non-coding upstream 9712 29485766 ~ 29486092 (+)
G129146 NA non-coding upstream 12948 29480966 ~ 29482856 (+)
G129145 NA non-coding upstream 15168 29478712 ~ 29480636 (+)
G129176 NA non-coding downstream 14130 29511836 ~ 29512133 (+)
G130265 NA non-coding downstream 23597 29521303 ~ 29522801 (+)
G130290 NA non-coding downstream 48579 29546285 ~ 29546516 (+)
G130291 NA non-coding downstream 48953 29546659 ~ 29547042 (+)
G129155 NA other upstream 10674 29484633 ~ 29485130 (+)
G128853 LOC106605419 other upstream 514516 28939899 ~ 28981288 (+)
LOC110485990 LOC106579931 other upstream 551414 28931988 ~ 28951235 (+)
G128490 NA other upstream 947889 28250842 ~ 28547915 (+)
G130308 NA other downstream 102320 29600026 ~ 29641096 (+)
G130414 NA other downstream 291870 29789576 ~ 29789831 (+)
G131491 NA other downstream 1202476 30700182 ~ 30700623 (+)
G131517 ccne2 other downstream 1250349 30748055 ~ 30749954 (+)

Expression


Co-expression Network