Gene
RNA
| Item | Value |
|---|---|
| gene id | G130558 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 29548963 ~ 29549162 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: mucin-1 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU150463 | True | 200 | lncRNA | 0.36 | 1 | 29548963 | 29549162 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533728 | LOC106605434 | coding | downstream | 4084 | 29543049 ~ 29544879 (-) |
| mtx1a | mtx1 | coding | downstream | 8118 | 29523472 ~ 29540845 (-) |
| LOC110486192 | LOC106605431 | coding | downstream | 36809 | 29496867 ~ 29512154 (-) |
| hjv | LOC106605430 | coding | downstream | 59713 | 29478694 ~ 29489250 (-) |
| LOC110486122 | LOC106605427 | coding | downstream | 78925 | 29460944 ~ 29470038 (-) |
| LOC110486216 | LOC106605435 | coding | upstream | 8141 | 29557303 ~ 29570811 (-) |
| si:dkey-7j14.6 | LOC106605437 | coding | upstream | 22550 | 29571712 ~ 29575352 (-) |
| LOC110486243 | LOC106605438 | coding | upstream | 30690 | 29579852 ~ 29599325 (-) |
| LOC110486252 | LOC106605439 | coding | upstream | 54087 | 29603249 ~ 29639641 (-) |
| plin6 | NA | coding | upstream | 149497 | 29698659 ~ 29707941 (-) |
| G130254 | NA | non-coding | downstream | 54040 | 29494577 ~ 29494923 (-) |
| G130252 | NA | non-coding | downstream | 55588 | 29493082 ~ 29493375 (-) |
| G130245 | NA | non-coding | downstream | 70332 | 29478427 ~ 29478631 (-) |
| G130244 | NA | non-coding | downstream | 70746 | 29477444 ~ 29478217 (-) |
| G130536 | NA | non-coding | upstream | 5328 | 29554490 ~ 29554966 (-) |
| G130563 | NA | non-coding | upstream | 15799 | 29564961 ~ 29565292 (-) |
| G130564 | NA | non-coding | upstream | 16646 | 29565808 ~ 29566032 (-) |
| G130565 | NA | non-coding | upstream | 16945 | 29566107 ~ 29566318 (-) |
| G130567 | NA | non-coding | upstream | 19489 | 29568651 ~ 29568983 (-) |
| LOC110534614 | LOC106605399 | other | downstream | 1071132 | 28475823 ~ 28533709 (-) |
| G129582 | NA | other | downstream | 1238231 | 28310319 ~ 28310732 (-) |
| LOC110485663 | LOC106579570 | other | downstream | 1398977 | 27933389 ~ 28149986 (-) |
| G129250 | NA | other | downstream | 1782431 | 27766157 ~ 27766532 (-) |
| LOC110485245 | ubr5 | other | downstream | 2270839 | 27231538 ~ 27278158 (-) |
| LOC110486376 | LOC106605451 | other | upstream | 319884 | 29859575 ~ 29878744 (-) |
| c2h8orf37 | cssa05h8orf37 | other | upstream | 1340531 | 30889693 ~ 30896340 (-) |
| trnae-cuc | LOC106605367 | other | upstream | 1347864 | 30897026 ~ 30899564 (-) |
| LOC110486852 | LOC106605360 | other | upstream | 1643257 | 31192419 ~ 31196292 (-) |
| LOC110486868 | LOC106605361 | other | upstream | 1647911 | 31196917 ~ 31199241 (-) |
