G130536


Basic Information

Item Value
gene id G130536
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 29554490 ~ 29554966 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU150440
tgcaaaGCTCCAATGCACGGTCACTTCAAATGTGTACAGATAGTTACATCTCACAGATTTGATTAATAATGGTGGATTTATTTAATCAGATTGTCAAATATACATAACATTGGTGTTTTACTCACTGGGTTGGGTTTGTGGAATAGTTAACTTCTTGGCATGCTAGTGTCCTATCTCAAAACATGTCTTATCCAGCAGTAGGGAATTAGATCTGGATTTGATTTATAGTCTTTGAAAACAATGAACTTCTTGTTAACTGTACCTGATTGGATATTGTTCTTAGGGGCACCCTTACTCATTCTTCTGAAATGTTAATTGCAGGATACATATTTTGACCCCATTTACTGATCTAGGATGATCTTTCTTTTTTACAAAGGTTAAGCTTGCCTTCAGTAAAGACTGAAAATACAACTCAACCCATTACCACAAGGAAGCCAAAATGTCTAACCTGGCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU150440 True 455 lncRNA 0.36 2 29554490 29554966

Neighbor

gene id symbol gene type direction distance location
LOC110533728 LOC106605434 coding downstream 9611 29543049 ~ 29544879 (-)
mtx1a mtx1 coding downstream 13645 29523472 ~ 29540845 (-)
LOC110486192 LOC106605431 coding downstream 42336 29496867 ~ 29512154 (-)
hjv LOC106605430 coding downstream 65240 29478694 ~ 29489250 (-)
LOC110486122 LOC106605427 coding downstream 84452 29460944 ~ 29470038 (-)
LOC110486216 LOC106605435 coding upstream 2337 29557303 ~ 29570811 (-)
si:dkey-7j14.6 LOC106605437 coding upstream 16746 29571712 ~ 29575352 (-)
LOC110486243 LOC106605438 coding upstream 24886 29579852 ~ 29599325 (-)
LOC110486252 LOC106605439 coding upstream 48283 29603249 ~ 29639641 (-)
plin6 NA coding upstream 143693 29698659 ~ 29707941 (-)
G130558 NA non-coding downstream 5328 29548963 ~ 29549162 (-)
G130254 NA non-coding downstream 59567 29494577 ~ 29494923 (-)
G130252 NA non-coding downstream 61115 29493082 ~ 29493375 (-)
G130245 NA non-coding downstream 75859 29478427 ~ 29478631 (-)
G130563 NA non-coding upstream 9995 29564961 ~ 29565292 (-)
G130564 NA non-coding upstream 10842 29565808 ~ 29566032 (-)
G130565 NA non-coding upstream 11141 29566107 ~ 29566318 (-)
G130567 NA non-coding upstream 13685 29568651 ~ 29568983 (-)
LOC110534614 LOC106605399 other downstream 1076659 28475823 ~ 28533709 (-)
G129582 NA other downstream 1243758 28310319 ~ 28310732 (-)
LOC110485663 LOC106579570 other downstream 1404504 27933389 ~ 28149986 (-)
G129250 NA other downstream 1787958 27766157 ~ 27766532 (-)
LOC110485245 ubr5 other downstream 2276366 27231538 ~ 27278158 (-)
LOC110486376 LOC106605451 other upstream 314080 29859575 ~ 29878744 (-)
c2h8orf37 cssa05h8orf37 other upstream 1334727 30889693 ~ 30896340 (-)
trnae-cuc LOC106605367 other upstream 1342060 30897026 ~ 30899564 (-)
LOC110486852 LOC106605360 other upstream 1637453 31192419 ~ 31196292 (-)
LOC110486868 LOC106605361 other upstream 1642107 31196917 ~ 31199241 (-)

Expression


Co-expression Network