G130657


Basic Information

Item Value
gene id G130657
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 29762371 ~ 29770692 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU150573
TTTGCATAGAAAACCTACCCATAGGTTCTCCTCATATAAAATACTTCTCGCATTTTCACATACCCAAATTCAAAACATAATGTAGATCTCCCATTTAGTCATTCCCATTCGGCAAGCTTGGTCATTACCATGAAAAGTCACTCTCTTCTACCATAAACCACTGAGTTAACATTATTGTAAAATGACCTAGTATAATCTGGAAGACTATTATGAATACAAAAATATGTCATTTTTAATTATCTAATTAAGAGCCAATGATATTAACATAAAGTGCAACAGAATATAAAATTGAAACTTTCTATCCCTTCACTACTTTTGCATGGTCACAGCATCATATCTGTCTGACCTAAAATGATAGCTGTGCACACTCAGTGTATGGATGTGAATTCTAACATTGTTTCATTCCTCTGAGAGAATATGTCAACTGTCAAAATGCTCGAACACACTGAGGTACAGAACTACCGTGGAATGACTAGAGggttacagacagacatacagttgaagtcggaagtttacatacacctcagccaaatacatttaaactcagtttttcacaattcctgacatttattcctagtaaaaattatgttttacgtcagttaggatcaccactttattttaagaatgtgaaatgtcagaataaaagtagagaattatttatttaagcttttatttctttcatcacatttccagtgggtcagaagtttaaatacactcaattagtatttggtagcattgccttgaaattgttgaacttgggtcaaatgtttcaggtagccttccacaagcttccctcaataagttgggtgaattttggcccattcctcctgacagagctggtgtaactgagccaggtgtgtaggcctccttgctcgcgcatgctttttcagttctgcccacacattttctataggattgagggctgggctttgtgatggtcattGCAATACcccgactttgttgtccttaagccattttgccacaattttggaagtatgcttggggtcattgtccatttggaagacccatttgtaaccaagttttaacttcctgactgatgtcttgaaatgttgcctcatatatttccacataatttcccaccctcatgatgccatctattttgtgaagtgtaccagtccctcctgcagcaaagcacctccacaacatgatgctgccacccccgtgcttcacggttgggatgttgttcttcggcttgcaagcctcccccttttccctccaaacatatacgatggtcattatggccaaacatttgtatttttgtcagaccaggggacatttctccaaaaagtatgatctttgtcaacatgtgcagttgcaaacctggcttttatatggcggttttggagcagtggcttcttccttgctcagaggcctttcaggttatgtcgatataggactcgttttactgtggatagatacttttgtacccatttcctccagcatcttcacaaggtcctttgctgctgttctgggattgatttgcacttttcgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU150573 True 1513 lncRNA 0.39 2 29762371 29770692

Neighbor

gene id symbol gene type direction distance location
LOC101268921 LOC106605446 coding downstream 10193 29743074 ~ 29752178 (-)
LOC110486325 LOC106605445 coding downstream 21113 29731918 ~ 29741258 (-)
LOC118938819 LOC106580151 coding downstream 52723 29708110 ~ 29709648 (-)
plin6 NA coding downstream 54430 29698659 ~ 29707941 (-)
LOC110486252 LOC106605439 coding downstream 122730 29603249 ~ 29639641 (-)
polr3glb LOC106580193 coding upstream 34293 29804985 ~ 29812180 (-)
LOC110486376 LOC106605451 coding upstream 88883 29859575 ~ 29878744 (-)
iqgap3 LOC106605450 coding upstream 109533 29880225 ~ 29900765 (-)
LOC110534642 LOC106605453 coding upstream 189970 29960662 ~ 29986096 (-)
LOC110486409 LOC106605454 coding upstream 225225 29995917 ~ 30041494 (-)
LOC110486216 LOC106605435 non-coding downstream 191596 29557303 ~ 29570811 (-)
G130567 NA non-coding downstream 193388 29568651 ~ 29568983 (-)
G130565 NA non-coding downstream 196053 29566107 ~ 29566318 (-)
G130564 NA non-coding downstream 196339 29565808 ~ 29566032 (-)
G130563 NA non-coding downstream 197079 29564961 ~ 29565292 (-)
G130671 NA non-coding upstream 18962 29789654 ~ 29789873 (-)
G130673 NA non-coding upstream 21272 29791964 ~ 29792173 (-)
G130674 NA non-coding upstream 22109 29792801 ~ 29793179 (-)
G130675 NA non-coding upstream 23660 29794352 ~ 29794580 (-)
G131002 NA non-coding upstream 220704 29991396 ~ 29991629 (-)
LOC110534614 LOC106605399 other downstream 1284540 28475823 ~ 28533709 (-)
G129582 NA other downstream 1451639 28310319 ~ 28310732 (-)
LOC110485663 LOC106579570 other downstream 1612385 27933389 ~ 28149986 (-)
G129250 NA other downstream 1995839 27766157 ~ 27766532 (-)
LOC110485245 ubr5 other downstream 2484247 27231538 ~ 27278158 (-)
c2h8orf37 cssa05h8orf37 other upstream 1119001 30889693 ~ 30896340 (-)
trnae-cuc LOC106605367 other upstream 1126334 30897026 ~ 30899564 (-)
LOC110486852 LOC106605360 other upstream 1421727 31192419 ~ 31196292 (-)
LOC110486868 LOC106605361 other upstream 1426381 31196917 ~ 31199241 (-)

Expression


Co-expression Network