Gene
RNA
| Item | Value |
|---|---|
| gene id | G130427 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 29805174 ~ 29806131 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: DNA-directed RNA polymerase III subunit RPC7-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU150319 | True | 537 | lncRNA | 0.39 | 2 | 29805174 | 29806131 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486333 | LOC106605448 | coding | upstream | 36547 | 29765682 ~ 29768627 (+) |
| LOC110486279 | LOC106605442 | coding | upstream | 107488 | 29685855 ~ 29697686 (+) |
| LOC110486269 | LOC106580132 | coding | upstream | 120024 | 29679207 ~ 29685150 (+) |
| LOC118936731 | dcst2 | coding | upstream | 143146 | 29654875 ~ 29662028 (+) |
| LOC118944146 | NA | coding | upstream | 210958 | 29594164 ~ 29594216 (+) |
| LOC110486369 | LOC106605449 | coding | downstream | 9649 | 29815780 ~ 29833805 (+) |
| LOC110486403 | LOC106580236 | coding | downstream | 94726 | 29900857 ~ 29914741 (+) |
| gnrh-r | LOC106605452 | coding | downstream | 119605 | 29925736 ~ 29930354 (+) |
| LOC110486448 | cr3l4 | coding | downstream | 272517 | 30078648 ~ 30083392 (+) |
| LOC110486462 | NA | coding | downstream | 291040 | 30097171 ~ 30103693 (+) |
| G130424 | NA | non-coding | upstream | 5347 | 29799535 ~ 29799827 (+) |
| G130411 | NA | non-coding | upstream | 19231 | 29785704 ~ 29785943 (+) |
| G130410 | NA | non-coding | upstream | 19809 | 29785126 ~ 29785365 (+) |
| G130335 | LOC106580167 | non-coding | upstream | 60307 | 29726551 ~ 29744867 (+) |
| G130345 | LOC106581475 | non-coding | upstream | 133229 | 29664010 ~ 29671945 (+) |
| G130419 | NA | non-coding | downstream | 34328 | 29840459 ~ 29840782 (+) |
| G130451 | NA | non-coding | downstream | 49845 | 29855976 ~ 29932819 (+) |
| G130468 | NA | non-coding | downstream | 74181 | 29880312 ~ 29891518 (+) |
| G130479 | LOC106605450 | non-coding | downstream | 86142 | 29892273 ~ 29900179 (+) |
| G130414 | NA | other | upstream | 15343 | 29789576 ~ 29789831 (+) |
| G130308 | NA | other | upstream | 164078 | 29600026 ~ 29641096 (+) |
| G129155 | NA | other | upstream | 320044 | 29484633 ~ 29485130 (+) |
| LOC110534631 | LOC106580029 | other | upstream | 327044 | 29424822 ~ 29478401 (+) |
| G131491 | NA | other | downstream | 894051 | 30700182 ~ 30700623 (+) |
| G131517 | ccne2 | other | downstream | 941924 | 30748055 ~ 30749954 (+) |
| LOC110534710 | LOC106605356 | other | downstream | 1485339 | 31262054 ~ 31294577 (+) |
| eaf1 | LOC106581241 | other | downstream | 1554305 | 31360408 ~ 31366322 (+) |
| G132342 | LOC100136303 | other | downstream | 2051517 | 31834170 ~ 31887572 (+) |
